Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001262.1
Length=237
Score E
Sequences producing significant alignments: (Bits) Value
seq27767 318 8e-85
>seq27767
Length=1935
Score = 318 bits (352), Expect = 8e-85
Identities = 203/214 (95%), Gaps = 5/214 (2%)
Strand=Plus/Minus
Query 24 TCGAGATCCAGGAACGCGGCGGTCTTGCCGGTGCCGGTCTGGGCGCGGCCGAATGGCGTC 83
|||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct 618 TCGAGATC-AGGAACGCGGCGGTCTTGCCGGTGCCGGTTTGGGCGCGGCCGA-TGGCGTC 561
Query 84 TTTTGCCGGCCAGGGTGAAACCCAGCACCTAGCGCCTTGGATCGGCGTGCAGTACGGGAA 143
||| ||||||||||||||| ||||| |||| |||||| ||||||||||||||||||||||
Sbjct 560 TTT-GCCGGCCAGGGTGAAGCCCAGTACCT-GCGCCT-GGATCGGCGTGCAGTACGGGAA 504
Query 144 ACCCAGGTCCTGGATGGCGTGCATCAGTTCCGGGGCCAGTTTGAAATCGTGGAAGCGGGT 203
||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 503 ACCCAAGTCCTGGATGGCGTGCATCAGTTCAGGCGCCAGTTTGAAATCGTGGAAGCGGGT 444
Query 204 CTTGCCTTCCTGGGGCTCGACGACGAAGTCTTCG 237
||||||||||||||||||||||||||||||||||
Sbjct 443 CTTGCCTTCCTGGGGCTCGACGACGAAGTCTTCG 410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658354008264
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