Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001277.1
Length=476
Score E
Sequences producing significant alignments: (Bits) Value
seq97821 526 6e-147
>seq97821
Length=19066
Score = 526 bits (582), Expect = 6e-147
Identities = 401/474 (85%), Gaps = 0/474 (0%)
Strand=Plus/Plus
Query 1 CGACCCGCTGCAAGACGGCACCGACCTGCTGTTTCGCATCGGCGTGCTGAACGATTCCGG 60
||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| |
Sbjct 4590 CGACCCGCTGCAAGACGGCACCGACCTGCTGTTCCGCATCGGCGTGCTCAACGACTCCAG 4649
Query 61 CATGCAAGCGCGAATCTTCGCCCCGCAGCGCCTCCGCCTTGCGGCCAGCCCCGGCTACCT 120
|||||| ||||| ||||||||||| || ||| ||||| | || |||||||| | ||||||
Sbjct 4650 CATGCAGGCGCGCATCTTCGCCCCTCAACGCTTCCGCATCGCCGCCAGCCCGGCCTACCT 4709
Query 121 GGAACGTTTCGGTACGCCGCGCCATCCGGACGAACTGGTGAACCACCAGTGCCTGGCCTA 180
|| || ||| | |||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct 4710 GGCCCGACACGGCGCACCGCAACATCCTGACGAACTGATCAACCACCAGTGCCTGGCCTA 4769
Query 181 CAAGGGTGTCACCGGCCAACAACGCTGGTTCTTCCGCCGCGACCAGGACGACTGGACGTC 240
||| || | |||||||| ||||||||||| |||||| | ||||| ||||||||| |
Sbjct 4770 CAAAGGCATTACCGGCCAGCAACGCTGGTTTTTCCGCAAGGGCCAGGGCGACTGGACACC 4829
Query 241 CTACAGCGTCAAGGGCCCGATCACCGGCAACCACGCCGACACTCTGACCCACGCCGCCGA 300
|| ||||||||||||||||||||||||||||| |||||||| || ||| ||||||||||
Sbjct 4830 TTATAGCGTCAAGGGCCCGATCACCGGCAACCATGCCGACACGCTCACCTACGCCGCCGA 4889
Query 301 GCAAGGCCTGGGGCTGGTGGTGTTTCCATCTTGGTTGATCGGCGAAGGGCTGCGTGCCGG 360
||| || |||||||||||||||||||| || |||||||| ||||| | ||||||| ||
Sbjct 4890 GCAGGGGCTGGGGCTGGTGGTGTTTCCGTCGTGGTTGATTGGCGACAGTTTGCGTGCGGG 4949
Query 361 CACGCTGCAGGCGGTGCTGACCGACTACGAAGTGGCGACGACCCTGGAGCCGCAACAGAT 420
| | ||| ||| |||||||| || ||||| |||||||| || |||||||||| |||||
Sbjct 4950 CGCTTTGCGGGCAGTGCTGACGGAGTACGACGTGGCGACAACATTGGAGCCGCAGCAGAT 5009
Query 421 TGCGGCGCTGTGGCCGGGTAGTCGGCGGTTGTCGTTGAAGGTGCGGACGGTGAT 474
|||||| ||||||||||| || ||||| |||||| |||||||||||||||||||
Sbjct 5010 TGCGGCACTGTGGCCGGGGAGCCGGCGCTTGTCGCTGAAGGTGCGGACGGTGAT 5063
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1418917780992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |