Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001286.1
Length=411
Score E
Sequences producing significant alignments: (Bits) Value
seq69501 511 1e-142
seq83148 102 2e-19
>seq69501
Length=6721
Score = 511 bits (566), Expect = 1e-142
Identities = 298/308 (97%), Gaps = 0/308 (0%)
Strand=Plus/Plus
Query 60 GTCATAAGGGTCCACGCCGTCCTTGACCACCAGGATGTCTTCCATGATCAGGTATTGCAG 119
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 6414 GTCATAAGGGTCCACGCCGTCTTTGACGACCAGGATGTCTTCCATGATCAGGTATTGCAG 6473
Query 120 GTCGGAGCCAAAGAACATGTCCAGCGCGTCTTTCGGCGAGCAGATCATCGCTTCGCCACG 179
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6474 GTCGGAGCCGAAGAACATGTCCAGCGCGTCTTTCGGCGAGCAGATCATCGCTTCGCCACG 6533
Query 180 GCGGTTGAGCGAGGTGTTCAGGGACACGCCGTTGCCGGTCAGCACTTCCAGCTCTTTCAT 239
|||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct 6534 ACGGTTGAGCGAGGTGTTCAGCGACACACCGTTACCGGTCAGCACTTCCAGCTCTTTCAT 6593
Query 240 CATGTCGTAGTAGCGCGGGTTGTATTCGCGCTTGAGCACCTGGGCGCGGGAGGTGCCATC 299
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 6594 CATGTCGTAGTAGCGCGGGTTGTACTCGCGCTTGAGCACCTGGGCGCGGGAGGTGCCATC 6653
Query 300 TTCATGGACCACTTCCGGCACGCGGGTCTTCCACTCTTCCGACACTTCAAAGGTGAAGGT 359
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct 6654 TTCATGGACCACTTCCGGCACTCGGGTCTTCCACTCTTCCGCCACTTCAAAGGTGAAGGT 6713
Query 360 CATGAACG 367
||||||||
Sbjct 6714 CATGAACG 6721
>seq83148
Length=11876
Score = 102 bits (112), Expect = 2e-19
Identities = 64/69 (93%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 343 ACTTCAAAGGTGAAGGTCATGAACGGCGCCGGGTGATCGACCTTGATCATCTGCGGGGCC 402
|||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||
Sbjct 11876 ACTTCAAAGGTGAAGGTCATGAACGGCGCCGGATGGTCGACCTTGATCATCTGTGGGGCG 11817
Query 403 ACGGTGTCG 411
|| ||||||
Sbjct 11816 ACAGTGTCG 11808
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1211193331072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |