Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001305.1
Length=327
Score E
Sequences producing significant alignments: (Bits) Value
seq73398 477 2e-132
>seq73398
Length=8139
Score = 477 bits (528), Expect = 2e-132
Identities = 303/327 (93%), Gaps = 4/327 (1%)
Strand=Plus/Minus
Query 1 TCGAAGGGGCTACGCTGTTCAAGTTCATGGTGACGATGGAACGCGCCGAAGAACGCTTTA 60
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct 5682 TCGAAGGGGCTACGCTGTTCAAGTTCATGGTGCCGATGGAACGTGCCGAAGAACGCTTTA 5623
Query 61 ATACATTGGAGGCGTTGTTTGAGCGCCTCATTCCGCAAATCCGTATGAAGGACGCCCCAA 120
|||| |||||||||||||| ||||||||||| ||| ||||| | |||||||||||||||
Sbjct 5622 ATACCTTGGAGGCGTTGTTCGAGCGCCTCATCCCG-AAATCTGCTTGAAGGACGCCCCAA 5564
Query 121 TGCGCCTGTTCCGCATTTTGAGCCTGTTGTTGGTGGTCGTGGCACCTGCGGCATTCGCCG 180
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 5563 TGCGCCTGTTCCGCATGTTGAGCCTGTTGTTGGTGGTCGTGGCACCTGCGGCGTTCGCCG 5504
Query 181 ACAGCCCGTACCAGGTGGAAATGATCCTCGTGCGCCAGAACGCCGAGCCGGTGATCAACA 240
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 5503 ACAGCCCGTACCAGGTGGAAATGATCCTGGTGCGCCAGAACGCCGAACCGGTGATCAACA 5444
Query 241 GCCGCGCCGCGCCGGAAAACTGGGATGCCGGGGCCGTGCGCCTGGGCTCCGACAAACTGA 300
|||||||||| ||||||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct 5443 GCCGCGCCGCCCCGGAAAACTGGGATGCCGGGGCAGTGCGCCTGGG---CGACAGACTGA 5387
Query 301 GCCCGCCACGCCTGAACAATATCGTCG 327
||||||| |||||| ||| || ||||
Sbjct 5386 GCCCGCCGCGCCTGTCCAACATTGTCG 5360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 942749426560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |