Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= AAMG01001377.1 Length=151 Score E Sequences producing significant alignments: (Bits) Value seq91504 219 3e-55 >seq91504 Length=15501 Score = 219 bits (242), Expect = 3e-55 Identities = 139/151 (92%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 1 CGAAAATTGCTGAAGATGCCATCGCCCAAGTGCGCGCCCAGGTCGGCACTGACAACGTAT 60 |||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||| Sbjct 5256 CGAAAATTGCTGAAGATGCCATCGCCCAGGTTCGCGCCCAGGTCGGCACCGACAACGTAT 5315 Query 61 TGCTTGGCCTGTCCGGCGGCGTTGACTCCTCGGTTGTAGCGGCACTGCTGCACAAGGCCA 120 |||| |||||||||||||||||||||||||| || || || || ||||||||||| |||| Sbjct 5316 TGCTCGGCCTGTCCGGCGGCGTTGACTCCTCCGTGGTCGCAGCCCTGCTGCACAAAGCCA 5375 Query 121 TCGGCGACCAACTGACCTGCGTGTTTGTCGA 151 |||||||||||||||| |||||||| ||||| Sbjct 5376 TCGGCGACCAACTGACTTGCGTGTTCGTCGA 5406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 386719112120