Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= AAMG01001383.1 Length=561 Score E Sequences producing significant alignments: (Bits) Value seq72045 241 4e-61 >seq72045 Length=7621 Score = 241 bits (266), Expect = 4e-61 Identities = 153/165 (93%), Gaps = 1/165 (1%) Strand=Plus/Minus Query 398 ACCGGGCTGAGCCAGGTGCGCTGGCCCTCCATCACCTTGTAGTAGAACCGCCCCAGGAAC 457 ||||| |||||||||||||||| || |||||||||||||| |||||||||||||||||| Sbjct 7621 ACCGGCGTGAGCCAGGTGCGCTGCCCTTCCATCACCTTGTAATAGAACCGCCCCAGGAAC 7562 Query 458 GGAGTCGGCACCAGTACCACGGCAAAGAAGGCGATGATCAGCCAATAGTCATAACTGTGC 517 || | ||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct 7561 GGGGCCGGCACCAGCACCACCGCAAAGAAGGCAATGATCAGCCAATAGTCATAACTGTGC 7502 Query 518 ATAG-CCGCTCCTAGTTCCGATCCGCGCGTAACAGCGCAACCAGC 561 || | |||||||||||||||||||||||||||||||||||||||| Sbjct 7501 ATGGCCCGCTCCTAGTTCCGATCCGCGCGTAACAGCGCAACCAGC 7457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1690557446272