Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001445.1
Length=285
Score E
Sequences producing significant alignments: (Bits) Value
seq34786 342 8e-92
>seq34786
Length=2444
Score = 342 bits (378), Expect = 8e-92
Identities = 243/283 (86%), Gaps = 0/283 (0%)
Strand=Plus/Minus
Query 3 AGCTGGTGGGCTCGCGCGCCCTCGGCCCGCGTGATCGGCTGGTGCTGGTGCAGGTGGGCG 62
|| || | || || |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 341 AGATGATCGGTTCCCGCGCCCTCGGCCCGCGTGATCGGCTGGTGCTGGTGCAAGTGGGCG 282
Query 63 AGGAGCAGATCCTGCTCGGCATCACCCCCGGCCGCATCACCCCGCTGCATGTACTCAAGA 122
|||||||||||||||| |||||||| ||||| |||||||| ||||||||||| |||||||
Sbjct 281 AGGAGCAGATCCTGCTGGGCATCACGCCCGGTCGCATCACTCCGCTGCATGTGCTCAAGA 222
Query 123 CCCCGGTGGACGCGGTCAAGACCGAAGCCGCCACGCNNNNNNNNNNNNAGCGCCTGATGG 182
|||||||| || || | ||| | | ||||||||| ||||||||||||
Sbjct 221 CCCCGGTGAGCGTGGACCAGAGCCAGTCCGCCACGCCAGAATTCGCCCAGCGCCTGATGG 162
Query 183 AGTTGCTGGGCAAGGATCAAAAGGATAAGAAGTAATGCGCGTTTTGTTGACGCTCATGCT 242
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct 161 AGTTGCTGGGCAAGGATCAGAAGGATAAGAAGTAATGCGCGTTTTATTGACGCTCATGCT 102
Query 243 GTTGCTGGCCGCACCGATGGCCCTGGGCGCCGACCCGTTGTCG 285
|||||||||||| || |||| | ||||||||||||||||||
Sbjct 101 GTTGCTGGCCGCGCCACTGGCGTTTGGCGCCGACCCGTTGTCG 59
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 811756883976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |