Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001448.1
Length=310
Score E
Sequences producing significant alignments: (Bits) Value
seq30946 450 2e-124
>seq30946
Length=2255
Score = 450 bits (498), Expect = 2e-124
Identities = 286/309 (93%), Gaps = 1/309 (0%)
Strand=Plus/Plus
Query 1 CGACCTGTTTGACAGTGACGCCCGGGCGTGGGGCGAGCTTGTCGGTATTGCGGGCGATGG 60
|||| |||||||| |||||||| ||||| ||| ||||||||||||||||| |||||||
Sbjct 1115 CGACTTGTTTGACGGTGACGCCAGGGCGCATGGCCAGCTTGTCGGTATTGCGTGCGATGG 1174
Query 61 CGGTGACGGTATGCCCACGACGCAGCGCTTCTTCCAGCAGTTGGCTACCGGCACGGCCGG 120
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1175 CGGTGACGGTGTGACCACGACGCAGCGCTTCTTCCAGCAGTTGGCTACCGGCACGGCCAG 1234
Query 121 TGGCACCAATGATTGCAATCTTGCTCATGACGTTCTCCAGTTCGTTAAGGGTTTAAAACC 180
||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||
Sbjct 1235 TGGCACCAATGATTGCAATCTTGCTCATGACGTTCTCCAGTACGTT-AGGGTTTGAAACG 1293
Query 181 ATTCACCACTTCATTTCGCCCTTGGCGACTTTGGCGCTGAGTTCCAGCGAGCTTTCGTCG 240
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1294 GTTCACCACTTCATTTCGCCCTTGGCGACTTTGGCGCTCAGTTCCAGCGAGCTTTCGTCG 1353
Query 241 GCGAGGGTCGGGTAACGCTTTTTCATGGCCGCGATCAGGGCCGCGGAATCCTTCGCTTTG 300
|||||||| |||||||||||||||||||||||||||||||| | ||||||||| || |||
Sbjct 1354 GCGAGGGTGGGGTAACGCTTTTTCATGGCCGCGATCAGGGCGGTGGAATCCTTGGCCTTG 1413
Query 301 GCCGTCTCG 309
|| ||||||
Sbjct 1414 GCGGTCTCG 1422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 888421493504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |