Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001449.1
Length=395
Score E
Sequences producing significant alignments: (Bits) Value
seq63171 497 2e-138
>seq63171
Length=5006
Score = 497 bits (550), Expect = 2e-138
Identities = 347/395 (88%), Gaps = 0/395 (0%)
Strand=Plus/Minus
Query 1 CGACGGCACCGGCACGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGC 60
||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1440 CGACGGCACCGGCCCGGTGTGGAAGGGCGGACTGTTCCCGTTCCTGTTCATCACCATTGC 1381
Query 61 CTGTGGCGCGGTCTCGGGTTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCT 120
|||||| ||||||||||||||||| |||||||||||||||||||| ||||| || || |
Sbjct 1380 CTGTGGTGCGGTCTCGGGTTTCCACGCGCTGATCTCCTCGGGCACTACGCCGAAACTGTT 1321
Query 121 CGCCAGTGAGAGCCATGCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGT 180
| | || | | | || || ||||||||||||||||||||| ||||||||||||||||
Sbjct 1320 GGATAACGAAACCAACGCGCGCTACATCGGTTACGGCGGCATGTTGATGGAGTCGTTCGT 1261
Query 181 GGCCATCATGGCGATGGTTGCCGCCTCGGTGATTGAGCCCGGCGTGTACTTCGCCATGAA 240
|||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||
Sbjct 1260 GGCCATCATGGCCATGGTTGCCGCTTCGGTGATCGAGCCTGGCGTGTACTTCGCCATGAA 1201
Query 241 CAGCCCGGCTGCCATTGTCGGCACCGACGTGGTCACCGTGGCGCAAACCGTCAGCAGTTG 300
||||||||||||| | || |||| || ||||| || ||||||||||| |||||||| ||
Sbjct 1200 CAGCCCGGCTGCCGTGGTGGGCAGTGATGTGGTGACGGTGGCGCAAACTGTCAGCAGCTG 1141
Query 301 GGGCTTTGCCATTACGCCTGAGGCGCTGTCGGCCGTTGCCCACAATATCGGTGAAACCAC 360
||||||||||||||| || || || ||| |||| || |||||| | ||||||||||||||
Sbjct 1140 GGGCTTTGCCATTACTCCGGAAGCACTGACGGCGGTCGCCCACGACATCGGTGAAACCAC 1081
Query 361 CATCCTGGCACGTGCCGGCGGCGCGCCGACTCTGG 395
||||||||| ||||||||||| || ||||| ||||
Sbjct 1080 CATCCTGGCGCGTGCCGGCGGTGCACCGACCCTGG 1046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1160061158784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |