Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= AAMG01001464.1 Length=239 Score E Sequences producing significant alignments: (Bits) Value seq66123 291 1e-76 >seq66123 Length=5684 Score = 291 bits (322), Expect = 1e-76 Identities = 197/221 (89%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 19 GGCTTGAGTTGCAGCACGTTGTTGGCCAGGTTGCCGACATCACCGATGTTGCGGAAGAAG 78 |||||||| |||||||| ||||||||||||||||| |||||||||||||| ||||||||| Sbjct 2457 GGCTTGAGCTGCAGCACATTGTTGGCCAGGTTGCCCACATCACCGATGTTACGGAAGAAG 2516 Query 79 TTGTGAACGCCGTCCTGCACAAATTGTGGGGTGACGAACTGATAGCCCTGGGCGATTGGC 138 ||||||||||| ||||| || ||||| ||||| ||||||||||| |||||||| | |||| Sbjct 2517 TTGTGAACGCCATCCTGAACGAATTGCGGGGTCACGAACTGATAACCCTGGGCCAGTGGC 2576 Query 139 TTGAGGGCATAGGTGTCAACGGTGTCGTTGAAGGTGAAGATGGGGCGGTTGACGCTTTCC 198 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct 2577 TTGAGGGCATAGGTATCAACGGTGTCGTTGAAGGTGAAGATCGGGCGGTTGACGCTTTCC 2636 Query 199 CACGGGTCATCTTCCGAGGCCGCTTGGGCATCGAATGGCGC 239 || || || |||||||| || || || || |||| ||||| Sbjct 2637 CATGGATCGTCTTCCGATGCAGCCTGTGCGGCGAAAGGCGC 2677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 664745794752