Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001488.1
Length=376
Score E
Sequences producing significant alignments: (Bits) Value
seq110703 197 3e-48
>seq110703
Length=29075
Score = 197 bits (218), Expect = 3e-48
Identities = 249/342 (73%), Gaps = 0/342 (0%)
Strand=Plus/Minus
Query 8 TCAAGGCCCAGGGTGGTTTGCTGGTGAAGAACTAGGTCTATGGTCAGACCTTCTCCGTTG 67
|||||||| |||| |||||| |||||||||| | | ||| || ||||| || |
Sbjct 7292 TCAAGGCCGAGGGCGGTTTGTTGGTGAAGAATGAAGCCTACGGCGGCGCCTTCAATGTGG 7233
Query 68 ATCTCCTGACCCACGCACACCTGATCCAGCTGAAATCCAAAATGATCGGCGTCTGCGATG 127
| | ||||| | || ||||||||||||||||||| ||||||| |||||| |||| |
Sbjct 7232 ACCGCCTGATGCTGGCGGACCTGATCCAGCTGAAATCGAAAATGAACGGCGTGGGCGAAG 7173
Query 128 GCCGCGTGCTGCCTCCCCGGCAACCCCAGCTGCACGTGCCGGCCACCTGGACGCCGGGCC 187
||| ||||||| |||| | || || || | ||||| | | |||| |||||||||
Sbjct 7172 GCCAGGTGCTGCAGACCCGAGAGGCCGAGGTGAAACTGCCGACGAGCTGGGCGCCGGGCC 7113
Query 188 AGACGCTGACGGCTCGATTGCACATGGTCAACCTGCCCGCCCGGCCCACCGACAAGCCCA 247
| || |||| || | || | |||| ||| |||| | | ||| |||||||| ||
Sbjct 7112 AAACCCTGAGTGCGCACCTGAAGATGGCCAATGTGCCGGTCAAGCCTACCGACAAACCGG 7053
Query 248 TCGAAACGTCGTTGACCTGCACGATTGGCGCACGCATTCCGGCACGCCAGGTGTTTGCCG 307
||||||| | |||||||||| | | |||| ||| | ||||| ||| ||||||||||
Sbjct 7052 TCGAAACCACCTTGACCTGCAAGGTGGGCGAGCGCTTCCCGGCGCGCAAGGTGTTTGCGT 6993
Query 308 CGTTGACGGGCGACGCGATCAAACTGGCCTGCGACCAGGGCG 349
||||||||||||| || || || ||||||| |||| ||
Sbjct 6992 CGTTGACGGGCGATGCCATTCGGTTGACCTGCGAGCAGGACG 6951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1099341704192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |