Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001493.1
Length=345
Score E
Sequences producing significant alignments: (Bits) Value
seq105927 118 2e-24
>seq105927
Length=24763
Score = 118 bits (130), Expect = 2e-24
Identities = 161/225 (72%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 121 AGGTCGGGGTTGAGCGTGGCGAGGAATTGCAGGCGCACGGCTTTGTTGTCGACGCGGTCG 180
|||||| ||||||| ||||| |||||||||||||||||| || |||| |||| | ||
Sbjct 14531 AGGTCGTCGTTGAGCTGGGCGAAGAATTGCAGGCGCACGGCCTTTTTGTTGACGTCGCCG 14590
Query 181 TAATCCTTGTCGTCGTAGACGTTCTTGATAAAACCGTCGCGCTCCTTGGAATACAGCGAC 240
|| | ||||| | |||||| || ||||||||||| | ||| ||||||||
Sbjct 14591 TAGGTGTGATCGTCCACCAGGTTCTTCTGGAATCCGTCGCGCTCTTCGGAGTACAGCGAG 14650
Query 241 ACGCGGGCGGCCAGGCGGTCTTCCACCAGGGTGCCGCCGATGGCGCCATTGACGATTTTC 300
| || ||||| || || || ||||| | ||||| | ||||| ||| |||
Sbjct 14651 ATCCGCGCGGCGAGTTTTTCATCGACCAGCGCACCGCCCAACGCGCCGCTGAGGATGCGT 14710
Query 301 TCGTTCTTGCTGCCGTAGCCAAGGGTGGCGTAGCCGTCGTTCTCG 345
|||||||||||||| |||| | ||| || | |||||| | |||
Sbjct 14711 TCGTTCTTGCTGCCAAAGCCGATCGTGCCGAAACCGTCGGTGTCG 14755
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1000273120384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |