Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= AAMG01001503.1 Length=170 Score E Sequences producing significant alignments: (Bits) Value seq73830 241 1e-61 >seq73830 Length=8306 Score = 241 bits (266), Expect = 1e-61 Identities = 156/170 (92%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 1 GTCAAGTTTCTACAAAAACGCCATGGGCGCCGGTATCAAGCCGATCTGCGGCGCCGACCT 60 |||||||| |||||| ||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 4882 GTCAAGTT-CTACAAGAACGCCATGGGCGCCGGCATCAAGCCGATCTGCGGTGCCGACCT 4940 Query 61 GTGGCTGTCCAACAAAGACCCGGACAACGCCCTGAGCCGCATCGGCCTGCTGGCGATGAA 120 |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| Sbjct 4941 GTGGCTGTCCAACAAAGACCCGGATAACCCCCTGAGCCGCATCAGCCTGCTGGCGATGAA 5000 Query 121 CGGTGTTGGTTACCGCAACCTCACCGAGCTGATTTCCCGTGGTTTCATCG 170 ||| || ||||| |||||||||||||| ||||||||||||| || |||| Sbjct 5001 CGGCGTGGGTTATCGCAACCTCACCGAATTGATTTCCCGTGGCTTTATCG 5050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444229160916