Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001545.1
Length=359
Score E
Sequences producing significant alignments: (Bits) Value
seq88939 495 8e-138
>seq88939
Length=14239
Score = 495 bits (548), Expect = 8e-138
Identities = 324/357 (91%), Gaps = 0/357 (0%)
Strand=Plus/Minus
Query 3 AAGTTCGGCACCTGGCGCAGCGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAATAC 62
|| |||||||||||||||||||| |||| ||||||||||||||||| || |||||||||
Sbjct 7696 AAATTCGGCACCTGGCGCAGCGCTGGCAAAATGTTCACGTTCGGCGAGGCTTTGGAATAC 7637
Query 63 ATGTAGCACACGTAACCGCTGCAAAAACCGCAGAAGTTGCACGGGCCCATCTGCGCGCCA 122
|||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 7636 ATGTAGCACACGTAGCCGCTGCAAAAACCGCAGAAGTTGCAAGGGCCCATCTGGGCGCCA 7577
Query 123 TAGGGGTTGGTGTACGGCCCCGAGGTATTGGCCGACGGCAGGTTGTAGGGTTTGTAACCG 182
|||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 7576 TAGGGGTTGGTGTAGGGCCCCGAGGTGTTGGCAGACGGCAGGTTGTAGGGTTTGTAACCC 7517
Query 183 ACCTCGGCAGCGGCTTTCTGAAACAGCTGTGCGGAGACGGTGTTTTTCTGCGATTCCAAG 242
|| || ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7516 ACTTCACTAGCCGCTTTCTGAAACAGCTGTGCGGAGACGGTGTTTTTCTGCGATTCCAAC 7457
Query 243 GGGAACGGGTTGGAGCGGTCCGGGGCATACGGGTTGCCACCGCGACCTTCGCCCACCAAC 302
|||||||||||||| ||||| || ||||| |||||||| || || |||||||| ||||||
Sbjct 7456 GGGAACGGGTTGGAACGGTCGGGCGCATAGGGGTTGCCGCCACGGCCTTCGCCGACCAAC 7397
Query 303 TGGCCTTTGACGGTCCAGGCCTGGCCGGAGGTGCCGAAGACTTTTTCCGCGTAGTCG 359
|||||||| ||||||||||| || || || ||||| |||||||||||||||||||||
Sbjct 7396 TGGCCTTTCACGGTCCAGGCTTGCCCAGAAGTGCCAAAGACTTTTTCCGCGTAGTCG 7340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1045013771136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |