Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001589.1
Length=431
Score E
Sequences producing significant alignments: (Bits) Value
seq77816 511 1e-142
>seq77816
Length=9881
Score = 511 bits (566), Expect = 1e-142
Identities = 367/431 (85%), Gaps = 0/431 (0%)
Strand=Plus/Plus
Query 1 CGATAGCCATATCAAGAGCCTGCGCAGCAAGCTCAGGAGTGTGGCGGCGGATGCCGAGCC 60
||| ||||||||||| ||||||||||||||| | | || ||||| || |||||||||||
Sbjct 5195 CGACAGCCATATCAAAAGCCTGCGCAGCAAGTTGCGCAGCGTGGCCGCCGATGCCGAGCC 5254
Query 61 GATCCAGACCCATCGCGGCCTNNNNNNNNNNNNNNNNNNNNNNNNCAGCTGATGCGCCTT 120
||||||||||||||||||||| |||||||||||||
Sbjct 5255 GATCCAGACCCATCGCGGCCTCGGCTACAGCTACAGCCCGAGCAATAGCTGATGCGCCTG 5314
Query 121 GGGCTGCGGATTTTCCTGGTGTATGCGCTGTTTATCGGCCTGACCGGCTACTTCGTGCTC 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5315 GGGCTGCGGATTTTCCTGGTGTATGCGCTGTTTATCGGCCTGACCGGCTACTTCGTGCTC 5374
Query 181 AACACCGTGATGAAGGAAATCCGCCCCGGCGTGCGCCAATCCACCGAAGAAACATTGGTG 240
| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 5375 AGCACCGTGATGAAGGAAATCCGCCCCGGCGTGCGCCAGTCCACCGAAGAAACCTTGGTG 5434
Query 241 GACACCGCCAACCTGCTGGCTGAAATCCTGCGTGCAGACGTTAAAAACGGCACCCTCGGC 300
||||||||||||||||| || || ||| |||| ||||| || |||||||||||||||
Sbjct 5435 GACACCGCCAACCTGCTAGCCGAGATCGTGCGCAATGACGTGAAGAACGGCACCCTCGGC 5494
Query 301 CAGAGCCATTGGCCCGAATTGCTCAAGGCTTATGGCAGTCGCCAGCCGGGAGCGACGATC 360
|| ||||| ||||| || |||||||||| ||||||| ||||||||||||||||| |||
Sbjct 5495 CAAAGCCACTGGCCGGAGCTGCTCAAGGCGTATGGCAACCGCCAGCCGGGAGCGACCATC 5554
Query 361 TGGGGCCTGCCGAAAAACCAGGTCAACCATCGCATCTACGTGACCGACGCCAAGGGCAGG 420
||||| ||||||| ||||||||||| |||||||||||||||||||| |||||||||| |
Sbjct 5555 TGGGGTTTGCCGAAGAACCAGGTCAATCATCGCATCTACGTGACCGATGCCAAGGGCACG 5614
Query 421 GTATTGCTCGA 431
|| ||||||||
Sbjct 5615 GTGTTGCTCGA 5625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1275108546432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |