Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001603.1
Length=479
Score E
Sequences producing significant alignments: (Bits) Value
seq39951 719 0.0
>seq39951
Length=2641
Score = 719 bits (796), Expect = 0.0
Identities = 447/478 (94%), Gaps = 1/478 (0%)
Strand=Plus/Minus
Query 1 CGAGGTAGTTGCCGCCGATGATGGCGACAAACGCCATGATGATGCCGATCAGGCTCAACA 60
|||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |
Sbjct 942 CGAGGTAGTTGCCGCCGATGATCGCGACAAACGCCATGATGATACCGATCAGGCTCAAAA 883
Query 61 CATCCATTAGAGGCAGGCCTCCACCAGATGCTTGCCGATGTCGTCCAGGCTGTAGATGGC 120
||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 882 CATCCATCAGAGGCAAGCCTCCACCAGATGCTTGCCGATGTCGTCCAGACTGTAGACGGC 823
Query 121 GTCGGCCAGGTCAGCCTTGACGATGGCCATGGGCATGCCATAGATCACGCAGCTGGCTTC 180
||| |||| ||| |||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 822 GTCAGCCAAGTCGGCCTTGACGATGGCCATGGGCATGCCGTAGATCACGCAGCTGGCCTC 763
Query 181 GTCCTGGGCCCAGATCACACTGCCGCCCTGCTTGAGCAGGCGCGCGCCTTCACGGCCGTC 240
||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||
Sbjct 762 GTCCTGGGCCCAGATGGCGCTGCCGCCCTGCTTGAGCAGGCGCGCGCCCTCACGGCCGTC 703
Query 241 GGCGCCCATGCTCGGTGAGGACCACCGCCAGAACTTTGTCGCCGTAGGACTTGGCGGCCG 300
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 702 GGCGCCCATGC-CGGTGAGCACCACCGCCAGAACTTTGTCGCCGTAGGACTTGGCTGCCG 644
Query 301 AACCGAAGGTGATGTCCACGCACGGCTTGTAGTTCAGGCGTTCATCCCCCGGCAGGATTT 360
|||| ||||||||||||||||| || |||||||||||||| || || |||||||||||||
Sbjct 643 AACCAAAGGTGATGTCCACGCATGGTTTGTAGTTCAGGCGCTCGTCGCCCGGCAGGATTT 584
Query 361 TGATCGCGCCACGGCCATCCACCATCATCTGCTTGCCACCCGGGGCCAGCAGCGCCAGGC 420
|||||||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||
Sbjct 583 TGATCGCGCCACGGCCGTCCACCATCATTTGCTTGCCACCCGGCGCCAGCAACGCCAGGC 524
Query 421 CAGGGCGCAGGATGTCGCCATCCTCGGCTTCCTTGACGCTGATGCGGCACAGATTGTC 478
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 523 CAGGACGCAGGATGTCGCCATCCTCGGCTTCCTTGACGCTGATGCGGCACAGCTTGTC 466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1428505063296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |