Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001616.1
Length=254
Score E
Sequences producing significant alignments: (Bits) Value
seq66824 340 3e-91
>seq66824
Length=5882
Score = 340 bits (376), Expect = 3e-91
Identities = 227/253 (90%), Gaps = 0/253 (0%)
Strand=Plus/Plus
Query 1 CGAACACATGGTTGAGCAGAAAATCGCGGCTCAGCGGGCGGTTCGGGTGCTGCAAGAGCA 60
||||||| || |||||||| || ||||||||||||||||| || ||||||||||| ||||
Sbjct 832 CGAACACGTGATTGAGCAGGAAGTCGCGGCTCAGCGGGCGATTGGGGTGCTGCAACAGCA 891
Query 61 GGCGCAGCGCGCGGTAATCCGAATTGCCCAGGCTGACCACCACACCGTCCGGCGAAAGCA 120
|||||| | |||||||||| || ||||||||||||||||||||||| |||||||| || |
Sbjct 892 GGCGCAACACGCGGTAATCGGAGTTGCCCAGGCTGACCACCACACCCTCCGGCGACAGTA 951
Query 121 ATTGGCGCGCCCGGGTGTCGAGTTGCCAGCCGGCGAAACGGATGCTCGGCGCTTCATCCA 180
| || |||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 952 ACTGCCGCGCCCGCGTGTCGAGCTGCCAGCCGGCGAAACGGATGCTCGGCGCTTCATCCA 1011
Query 181 GTCGCGCCCGGTCGGGACAACTCTGCACCCGGCGCAATACCACCTTGATCCGCACCAACA 240
| ||||| ||||||||| | ||||||||||||||||| ||||||||||||||||||| ||
Sbjct 1012 GGCGCGCGCGGTCGGGAAAGCTCTGCACCCGGCGCAACACCACCTTGATCCGCACCAGCA 1071
Query 241 GTTCCCGCGGGTC 253
| || ||||||||
Sbjct 1072 GCTCACGCGGGTC 1084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712684193412
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |