Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001645.1
Length=355
Score E
Sequences producing significant alignments: (Bits) Value
seq53979 439 5e-121
>seq53979
Length=3451
Score = 439 bits (486), Expect = 5e-121
Identities = 294/328 (90%), Gaps = 0/328 (0%)
Strand=Plus/Minus
Query 3 GACGAACTGGCGCCGCAGCATGTGAAAGTGCCGTCGGGCTCGTCGGTGCGCCTGGACTAC 62
||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||
Sbjct 1220 GACGAACTGGCACCGCAGCATGTGAAAGTGCCGTCGGGTTCGTCAGTGCGTTTGGACTAC 1161
Query 63 AGCGAACAGCCGCCGATCCTGGCGGTGCGCCTGCAGGAATTGTTCGGCCTGGCGGACACA 122
|||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||
Sbjct 1160 AGCGAACAGCCGCCGATCCTGGCGGTGCGCTTGCAGGAATTGTTCGGGCTGGCCGACACC 1101
Query 123 CCGCGCATTGCCGGCGGGCGCCAGGTGGTCAAGTTGCACCTGCTGTCCCCGTCGCGCAGG 182
||||||||||| || |||||||| ||||| ||| |||| ||||||||||| |||| ||
Sbjct 1100 CCGCGCATTGCTGGAGGGCGCCAAGTGGTGAAGCTGCATTTGCTGTCCCCGGCGCGTCGG 1041
Query 183 CCGGTGCAGGTGACCCAGGATCTGGCGAACTTCTGGCGCAGTACCTACGCCGAGGTGAAG 242
|||||||||||||| ||||| |||||||||||||||||||||||||| ||||| || |||
Sbjct 1040 CCGGTGCAGGTGACGCAGGACCTGGCGAACTTCTGGCGCAGTACCTATGCCGAAGTTAAG 981
Query 243 AAGGATCTGAAGGGGCGGTATCCGAAGCATTATTGGCCGGATGATCCGTTGGTGGCCGAA 302
|||||| | ||||||||||| |||||||| |||||||||||||| ||| ||||||| ||
Sbjct 980 AAGGATTTAAAGGGGCGGTACCCGAAGCACTATTGGCCGGATGACCCGCTGGTGGCGGAG 921
Query 303 GCGACGGCGCGGATCAAACCCCGTAAGT 330
|||||||||||||||||||| || ||||
Sbjct 920 GCGACGGCGCGGATCAAACCGCGCAAGT 893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1032230728064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |