Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= AAMG01001651.1 Length=155 Score E Sequences producing significant alignments: (Bits) Value seq102228 199 3e-49 >seq102228 Length=21998 Score = 199 bits (220), Expect = 3e-49 Identities = 137/155 (88%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 1 CCGACCTTCGTGCGCCATGGCAATGCCTTGATCTACTCTATTTCCGGCAGGCCAATGGCC 60 ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 5439 CCGACCTTCGTGCGCCATGGCAAAACCTTGATCTAACCTATTTCCGGCAGGCCAATGGCC 5498 Query 61 GCTGACATTACTTCTTGATGACACCCACTATGACCGATATCCCTGCCGACCTGCGCTATG 120 |||||||||||||||||| ||||| | ||||| ||||||||||||||||||||| | || Sbjct 5499 GCTGACATTACTTCTTGAGGACACAGATTATGAGCGATATCCCTGCCGACCTGCGTTTTG 5558 Query 121 CCGATAGTCCCCAATGGGCCCGTCTGGACGCTGAC 155 |||| || | | ||||||| || ||||| |||||| Sbjct 5559 CCGAAAGCCACGAATGGGCACGCCTGGAAGCTGAC 5593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396290762256