Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001674.1
Length=313
Score E
Sequences producing significant alignments: (Bits) Value
seq32164 379 4e-103
>seq32164
Length=2323
Score = 379 bits (420), Expect = 4e-103
Identities = 267/305 (88%), Gaps = 0/305 (0%)
Strand=Plus/Plus
Query 2 GAGCTGGATCACATGCTGGAAATCGCCGTTGAAGACGAAGAGATTGTCCAGCGTATTGCT 61
||||||||| || | |||||||| || ||||| |||||||| |||||||| |||||
Sbjct 1570 GAGCTGGATGCGGTGGTTGAAATCGCGGTGGAAGATGAAGAGATCGTCCAGCGCATTGCC 1629
Query 62 GGCCGTCGCGTACAAGAAGCCTCGGGCCGCGTGTACCACACCGTCTACAATCCGCCAAAG 121
||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct 1630 GGCCGTCGCGTTCACGAAGCCTCCGGCCGCGTGTACCACACTGTCTACAACCCGCCTAAA 1689
Query 122 GTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAAGGACGACACCGAA 181
|| | ||||||||||||||||||||||||||||||||| ||||| || ||||||||||||
Sbjct 1690 GTGGAAGGCAAGGACGATGTGACCGGCGAAGACCTGGTGCAGCGTAAAGACGACACCGAA 1749
Query 182 GAAACCGTTCGTCACCGCCTGTCTGTTTACCATTCGCAAACCAAGCCGCTGGTGGACTTC 241
|||||||| ||||| |||||||| || |||||||| || |||||||||||||||||||||
Sbjct 1750 GAAACCGTGCGTCATCGCCTGTCGGTCTACCATTCCCAGACCAAGCCGCTGGTGGACTTC 1809
Query 242 TACCAGAAGCTGGCTGCTGCCCAGGGCAAGCCCAAGTACAGCCACGTTGAAGGCGTTGGC 301
|||||||||||| | |||||||| |||||||| |||||||||||| || |||||||||
Sbjct 1810 TACCAGAAGCTGTCCGCTGCCCAAGGCAAGCCGAAGTACAGCCACATTCCTGGCGTTGGC 1869
Query 302 TCGGT 306
|||||
Sbjct 1870 TCGGT 1874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 898008775808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |