Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001688.1
Length=394
Score E
Sequences producing significant alignments: (Bits) Value
seq71344 576 3e-162
>seq71344
Length=7368
Score = 576 bits (638), Expect = 3e-162
Identities = 364/394 (92%), Gaps = 0/394 (0%)
Strand=Plus/Minus
Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60
||||||||||||| |||||||||||||| ||||||||||||||||| ||||| || || |
Sbjct 1014 CGATGGTCAGCAATTCGCCGCCCACCTGAGTCCACGCCAGGCCAGTCACCTGCCCTACCT 955
Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGG 120
|||||||||||||||||||||| |||| |||||| |||||| ||||||||||||||||
Sbjct 954 GATCCTGCTGCTCGGCCAGGCCATAGCGGAATTTCTTCACGCCCAGGAAGTGCTCCAGGG 895
Query 121 AGTCGGCCGTGACCTTCACCGAGAAGCGTTTTTCCAGCGCATGTTCCTTGACCGCCTTGC 180
| ||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| |
Sbjct 894 AATCGGCCGTGACCTTCACCGAGAAGCGTTTTTCCAGTGCATGCTCTTTGACCGCCTTAC 835
Query 181 GGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAGTAGC 240
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 834 GGCAGATCTTCGCGATCTGGCGCTCCAGGCCCCGCACACCGGCCTCGCGGGTGTAGTAGC 775
Query 241 GGACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCCCTTCTTCAGGCCATTGG 300
| ||||| ||||||||||| |||| ||||||||||||||||| ||||||||||| ||||
Sbjct 774 GCACGATATCGCGGATCGTCTCGACCTCAAATTCGATCTCGCCTTTCTTCAGGCCGTTGG 715
Query 301 CCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCTTCGGTGT 360
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct 714 CCGAAATCTGCTTGGGCGCGAGGTATTTGACGGCGATGTTGATCTTCTCGTCTTCGGTGT 655
Query 361 AACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394
|||||||||| |||||||||||||||| ||||||
Sbjct 654 AACCCGGCAGACGAATCACTTCCATCCTGTCCAG 621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1156865398016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |