Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001690.1
Length=455
Score E
Sequences producing significant alignments: (Bits) Value
seq64944 762 0.0
>seq64944
Length=5375
Score = 762 bits (844), Expect = 0.0
Identities = 442/455 (97%), Gaps = 0/455 (0%)
Strand=Plus/Minus
Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 845 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 786
Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAAC 120
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 785 CAACCTGGGTGGATTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAAC 726
Query 121 TGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGG 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 725 TGTTTTCGTGAACTTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGG 666
Query 181 CGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCA 240
|||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 665 CGATCACGCCATCTTTCATCGGACGAATGGCGGCAATATTGCCGGGTGTACGGCCGAGCA 606
Query 241 TGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATGGGTCCGAATGG 300
|||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| |
Sbjct 605 TGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGGTTACCGTGCGTCCGAATAG 546
Query 301 CCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 545 CCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGG 486
Query 361 CAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACATGG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 485 CAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACATGG 426
Query 421 GGAAAGGACCCTAAGCAACGCGTGGGTAAAAAAGT 455
| || |||||||| |||||||||||||||||||||
Sbjct 425 GAAAGGGACCCTAGGCAACGCGTGGGTAAAAAAGT 391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1351806804864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |