Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= AAMG01001718.1 Length=235 Score E Sequences producing significant alignments: (Bits) Value seq60754 251 9e-65 >seq60754 Length=4570 Score = 251 bits (278), Expect = 9e-65 Identities = 196/234 (84%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 2 GAGCGCCACGACAAAAGCGTTACCCCTTTTGCCCGCCAGCTCGGCTGGCAACCGGCGCCG 61 |||||||||||| | ||||| || || || ||||| || ||||||||||||||||||||| Sbjct 1698 GAGCGCCACGACGAGAGCGTCACGCCCTTCGCCCGGCAACTCGGCTGGCAACCGGCGCCG 1757 Query 62 GATGACGACAGCCTGATCGCGGCAGATCGCATCTTCATCAAGCACGGCTATGCGCCCACG 121 | ||| | |||||| | || || ||||||||||| ||||| |||||||||||||| | Sbjct 1758 AACGACCAAAGCCTGGTGGCCGCTGATCGCATCTTTATCAAACACGGCTATGCGCCACCC 1817 Query 122 CCCGAGACGATTGCCTACCTCAAAAGCCTGGCGCCGGCGCGTGTATTGGTGTGTGGAATA 181 |||||||| || ||||||| |||||||| |||||| |||||| |||||||||| || Sbjct 1818 CCCGAGACCGTTTCCTACCTGAAAAGCCTCGCGCCGCAACGTGTACTGGTGTGTGGTATC 1877 Query 182 CAAACCGACACCTGCGTGCTGGCGGCGGGGTTTGCCCTGTTTGATGCGGGGTTG 235 || |||||||||||||||||||||||||| || || ||||| || ||||||||| Sbjct 1878 CAGACCGACACCTGCGTGCTGGCGGCGGGATTCGCGCTGTTCGACGCGGGGTTG 1931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 651962221776