Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001718.1
Length=235
Score E
Sequences producing significant alignments: (Bits) Value
seq60754 251 9e-65
>seq60754
Length=4570
Score = 251 bits (278), Expect = 9e-65
Identities = 196/234 (84%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 2 GAGCGCCACGACAAAAGCGTTACCCCTTTTGCCCGCCAGCTCGGCTGGCAACCGGCGCCG 61
|||||||||||| | ||||| || || || ||||| || |||||||||||||||||||||
Sbjct 1698 GAGCGCCACGACGAGAGCGTCACGCCCTTCGCCCGGCAACTCGGCTGGCAACCGGCGCCG 1757
Query 62 GATGACGACAGCCTGATCGCGGCAGATCGCATCTTCATCAAGCACGGCTATGCGCCCACG 121
| ||| | |||||| | || || ||||||||||| ||||| |||||||||||||| |
Sbjct 1758 AACGACCAAAGCCTGGTGGCCGCTGATCGCATCTTTATCAAACACGGCTATGCGCCACCC 1817
Query 122 CCCGAGACGATTGCCTACCTCAAAAGCCTGGCGCCGGCGCGTGTATTGGTGTGTGGAATA 181
|||||||| || ||||||| |||||||| |||||| |||||| |||||||||| ||
Sbjct 1818 CCCGAGACCGTTTCCTACCTGAAAAGCCTCGCGCCGCAACGTGTACTGGTGTGTGGTATC 1877
Query 182 CAAACCGACACCTGCGTGCTGGCGGCGGGGTTTGCCCTGTTTGATGCGGGGTTG 235
|| |||||||||||||||||||||||||| || || ||||| || |||||||||
Sbjct 1878 CAGACCGACACCTGCGTGCTGGCGGCGGGATTCGCGCTGTTCGACGCGGGGTTG 1931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 651962221776
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |