Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001719.1
Length=232
Score E
Sequences producing significant alignments: (Bits) Value
seq95780 100 4e-19
>seq95780
Length=17828
Score = 100 bits (110), Expect = 4e-19
Identities = 145/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 26 CAACGGGCAACCTGAGCAACCAAGGCGGAGAACTGCGCAGTGCCACTCAGTTGGGGATGA 85
|||| ||||| |||||||| || | || |||| || | |||||| ||||||||
Sbjct 3445 CAACTGGCAAGCTGAGCAATCAGGCAGGCCAACTAAATAGCGGCACTCATTTGGGGATCT 3504
Query 86 CCGTTACTGCACTGGACAACAGCCGTAACGGGCATGTCGCAAGCCAAGCCGATGCAAGCC 145
| || | || ||||||||||||||| ||| | | | | ||||| |||||| | ||
Sbjct 3505 CGGTAATCGCGCTGGACAACAGCCGTGGCGGACGTATTTCCGGCCAAACCGATGTGAACC 3564
Query 146 TGGATATGCAAGGTGGTTACCTAAACAATAACAGTGGTTTGATCAACGCGCCGGGGCAAT 205
| || ||||||| || | || ||||| | ||| ||||| | |||||| ||||| |
Sbjct 3565 TCGACCTGCAAGGCGGCCATCTCAACAACCGTAATGGCTTGATAAGCGCGCCTGGGCAGT 3624
Query 206 TGCTGCTCAAGCAACTGGGCAGCGT 230
| |||| || ||||| || | |||
Sbjct 3625 TATTGCTTAAACAACTCGGTACCGT 3649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 642374542044
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |