Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001720.1
Length=447
Score E
Sequences producing significant alignments: (Bits) Value
seq90772 596 4e-168
>seq90772
Length=15112
Score = 596 bits (660), Expect = 4e-168
Identities = 380/413 (92%), Gaps = 0/413 (0%)
Strand=Plus/Plus
Query 35 CGCTATCTCAACCAGCAGGGGCGCGATGTGGTGAACAGCAACGCCAAGGCCCACAGCATT 94
||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 3570 CGCTACCTCAACCAGCAGGGGCGGGATGTGGTGAACAGCAATGCCAAGGCCCACAGCATT 3629
Query 95 CGCGATTGGGGCCAGGGGTTCGAGTTCAACTTCAAGTCCGGTTACACCGCAGGGCCGGTG 154
||||||||||||||||||||||||||||||||||||||||| ||||||| ||| || |||
Sbjct 3630 CGCGATTGGGGCCAGGGGTTCGAGTTCAACTTCAAGTCCGGCTACACCGAAGGCCCAGTG 3689
Query 155 GGTTTTGGCCTCGACTTGCAGGCGTTCTACGGGTTGAAGCTGGATTCCGGAGGCGACCTC 214
||||||||||| ||| |||||||||||||||||||||| ||||| ||||| |||||||||
Sbjct 3690 GGTTTTGGCCTGGACCTGCAGGCGTTCTACGGGTTGAAACTGGACTCCGGCGGCGACCTC 3749
Query 215 AACGACAAGGACCACCAGAGCCGTTACCCCGGCAGCATGTTCCCGCTGGACAACGGCAAA 274
||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct 3750 AACGACAAGGATCACCAGGGCCGCTACCCCGGCAGCATGTTCCCGCTGGACAACGGCAAA 3809
Query 275 TCCGCCGACCAGTTCGGCGTGCTCAGCCCGACGTTCAAGATGCGCTTCGCCAAAGATGAG 334
|||||||||||||||| ||| | ||||||||||||||| |||| || ||||| ||||||
Sbjct 3810 TCCGCCGACCAGTTCGATGTGTTGAGCCCGACGTTCAAGGTGCGTTTTGCCAAGGATGAG 3869
Query 335 CTGCGTGTGGGCACGCTGTACGGCAACAACCCGGTGCTGGCCAACACCGACGGCCGCCTG 394
||||| || |||||||| ||||||||||||||| | || |||||||||||||| || |||
Sbjct 3870 CTGCGCGTCGGCACGCTCTACGGCAACAACCCGATACTCGCCAACACCGACGGGCGTCTG 3929
Query 395 TACCAGCAGACCAATACCGGGGTGCAACTGGTGTCCAGGGACCTCAGCGACTT 447
|||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct 3930 TACCAGCAGACCAATACCGGTGTGCAACTGGTGTCCAAGGACCTCAGCGACTT 3982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1326240718720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |