Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001721.1
Length=387
Score E
Sequences producing significant alignments: (Bits) Value
seq76962 412 8e-113
>seq76962
Length=9529
Score = 412 bits (456), Expect = 8e-113
Identities = 325/392 (83%), Gaps = 6/392 (2%)
Strand=Plus/Minus
Query 1 CGAAACCGTGCGCTGTGTGGAGGAGGGCGTGTTGATGTCCACGGCGGATGCCAACGTTGG 60
||| |||||||| || ||||||||||| ||||||||||| |||||||| || ||||| ||
Sbjct 2325 CGAGACCGTGCGTTGCGTGGAGGAGGGTGTGTTGATGTCTACGGCGGACGCGAACGTGGG 2266
Query 61 TTCAATCTTCGGCATCGGCTTTGCCGCGTGGAGTGGCGGCGCGTTGCAGTTTATCAACCA 120
|| || |||||||| |||||||| || ||||| ||||||||||||||||| ||||||||
Sbjct 2265 GTCGATTTTCGGCATTGGCTTTGCGGCCTGGAGCGGCGGCGCGTTGCAGTTCATCAACCA 2206
Query 121 GTACGGGCTGAACGACTTCATCGCCCGCGCCCGCTACCTGGCAGAGCAGTATGGGGAGCG 180
|| ||||||||||||||||| |||||||| |||||| |||| ||||| ||||| || ||
Sbjct 2205 ATATGGGCTGAACGACTTCATTGCCCGCGCTCGCTACTTGGCTGAGCAATATGGCGAACG 2146
Query 181 CTTCTCGCCGCNNNNNNNNNNNNTGGAGAAAGCCGCGCAGGGTGAAGTGTTCCGGTAA-- 238
|||| |||| | |||||||||| ||||| ||||| |||||||||| |
Sbjct 2145 CTTCACGCCACCGGCGTTGTTGCTGGAGAAAGCGGCGCAAGGTGACGTGTTCCGGTGACT 2086
Query 239 ---TCAAAATGTAGGAGGGGAGAGCTTGCTTTGAAGGTGTATTTCAAGGCAGGCTCTGGG 295
| || || ||| | | |||||| ||||||| ||||||||||||||||||||||
Sbjct 2085 ATGTTCCGGTGAAGCAGGAG-GGGCTTGCCTTGAAGGGGTATTTCAAGGCAGGCTCTGGG 2027
Query 296 GTGTGCAATATTCCCATCGCCGTGTCAGGTATTTTTTATGTCGCTACGCGTCTGCATCCT 355
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 2026 GTGTGCAATATTCCCATCACCGTGTCAGGTATTTTTTATGTCGCTACGCGTCTGTATCCT 1967
Query 356 GGAAACCGATATTCTGCGCCCCGCTTTGATCG 387
|||||||||||| ||||| || | |||||||
Sbjct 1966 GGAAACCGATATCCTGCGTCCAGGCTTGATCG 1935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1134495072640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |