Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001745.1
Length=273
Score E
Sequences producing significant alignments: (Bits) Value
seq28282 315 1e-83
>seq28282
Length=2024
Score = 315 bits (348), Expect = 1e-83
Identities = 233/272 (86%), Gaps = 0/272 (0%)
Strand=Plus/Plus
Query 2 CGGGGCCACGGCCCCAATGCGGTACCTGGGGCACCAACCGCCATTGATCGGGCACAGATC 61
||| ||| |||| |||| |||| | ||| ||| ||||||||||| || | ||| |||
Sbjct 1103 CGGCGCCTCGGCACCAAATCGGTCCTTGGCGCAGCAACCGCCATTCATTGCATACAAATC 1162
Query 62 CAGACGCGTGCCGGCATACACCACCGGGGCGCCCGGTTGCGCGGCATCCAGCGTGCGCGC 121
|| ||||||||||||||||||||||| ||||| |||||||| || |||| |||||||||
Sbjct 1163 CAACCGCGTGCCGGCATACACCACCGGCGCGCCAGGTTGCGCCGCGTCCAACGTGCGCGC 1222
Query 122 GGTGGCACAGCCGGTGAGTTGCAGCGCCATCAAGAGCAGCAGTGCTTTATTCATCGCCGC 181
||||| ||||| || ||||||||||||| || || |||||| || ||||||||||| ||
Sbjct 1223 CGTGGCGCAGCCCGTCAGTTGCAGCGCCAGCACGATCAGCAGCGCCTTATTCATCGCTGC 1282
Query 182 CCAGGTGGTGCTCACCCCAACGTGGCAGCATGTCCTGGGGAATGTTCAACAGGTTGAGAA 241
|| |||||||| |||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct 1283 TCAAATGGTGCTCGCCCCAACGCGGCAGCATGTCCTGGGGAATGTTCAGCAGGTTGAGAA 1342
Query 242 TGCGCGCCACCACAAAGTCCACCAGGTCATCG 273
|||||||||||||||| |||||||||||||||
Sbjct 1343 TGCGCGCCACCACAAAATCCACCAGGTCATCG 1374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 773406165048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |