Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001757.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq98347 470 4e-130
>seq98347
Length=19400
Score = 470 bits (520), Expect = 4e-130
Identities = 349/415 (84%), Gaps = 0/415 (0%)
Strand=Plus/Minus
Query 1 CGACGTTCGGGCTCTGGAAGCCGACGTCATAGATGTGGAAGCCCAAGTGCATGATCTTCT 60
||||||| ||||||||||||||||||||||| || |||||||||| ||||||||||||||
Sbjct 18554 CGACGTTGGGGCTCTGGAAGCCGACGTCATAAATATGGAAGCCCAGGTGCATGATCTTCT 18495
Query 61 GGTCCAGGTGCAGGTAGGGGTAGTTCCCGTCCACTGGCAGCGACGGCGCCAGCTTCACNN 120
|||||||||||||||| |||||||| || |||| ||||| ||||||||||| |||||
Sbjct 18494 GGTCCAGGTGCAGGTACGGGTAGTTGCCATCCAGCGGCAGTGACGGCGCCAGTTTCACCA 18435
Query 121 NNNNNNNNNNNNNNNNNNNCGCCACTTCACCGGCAGCGCGGGCCACGGCGAGGATCATGC 180
||||||||||||||| |||||||||||||||||||||||||
Sbjct 18434 CGCCGACCAGCATCAGCGGCGCCACTTCACCGGCGGCGCGGGCCACGGCGAGGATCATGC 18375
Query 181 CGGTCGTCATGGCCGGGCTTGCCATGGGCAAGACGATCTTCCACAGCGTCTCGGCCTTGG 240
||||| |||| |||||||| ||||| |||| ||||||||||||||||| || |||||||
Sbjct 18374 CGGTCATCATCGCCGGGCTGGCCATCGGCAGCACGATCTTCCACAGCGTTTCCGCCTTGG 18315
Query 241 TCGCGCCCAAGGCCAGCGAGCCCTCGCGCACGGTACGCGGAATACGCGCCAAACCTTCTT 300
||||||||| ||||| ||||| || || ||||| || ||||| ||||||| |||||||
Sbjct 18314 TCGCGCCCAGTGCCAGGGAGCCTTCACGTACGGTGCGAGGAATCCGCGCCAGGCCTTCTT 18255
Query 301 CGGTGGCCACGATCACCACCGGAACAGCCAGCAGTGCCAGGGTCAACGATGCCCACAGCA 360
|||||||||||||||||||||| || |||||||| |||||||||| ||| ||||||| ||
Sbjct 18254 CGGTGGCCACGATCACCACCGGCACCGCCAGCAGCGCCAGGGTCAGCGAGGCCCACAACA 18195
Query 361 GGTCCGGGGTACCCAAGGTCGGCGCCGGCAGTGCTTCGGGGAAGACCAAGCGGTC 415
|| |||| ||||| |||||||| |||||||| ||||||| ||||| || ||||||
Sbjct 18194 GGCCCGGCGTACCGAAGGTCGGGGCCGGCAGGGCTTCGGCGAAGAACAGGCGGTC 18140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1239955177984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |