Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= AAMG01001787.1 Length=163 Score E Sequences producing significant alignments: (Bits) Value seq21002 168 6e-40 >seq21002 Length=1381 Score = 168 bits (186), Expect = 6e-40 Identities = 135/163 (83%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 1 TCGATCTACTCCCTGGAAGGCCAGGAAATGACGCCGTTGTTTGGCCAGCCGGAATGGTTC 60 |||||||| || ||||| |||||||| ||||||||||||| || || ||||| |||||| Sbjct 1367 TCGATCTATTCGCTGGAGGGCCAGGAGCTGACGCCGTTGTTCGGGCAACCGGAGTGGTTC 1308 Query 61 CTCGGGATCCTGCCGAGCCAGCAGGGCAACTTGAAGGTATTGGACACCGCGCGTTGGGTC 120 ||||| || ||||| |||||| |||||| | || || |||| |||||||| |||||| Sbjct 1307 CTCGGCATTCTGCCCAGCCAGGCCGGCAACCTCAAAGTCCTGGATACCGCGCGCTGGGTC 1248 Query 121 ATGCCCGACCGCTATCGGGATGATTTCCGCCAGGGCTTGCAAT 163 |||||||||||||| || || || ||||| |||||| |||||| Sbjct 1247 ATGCCCGACCGCTACCGCGACGACTTCCGTCAGGGCCTGCAAT 1205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421857908208