Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001989.1
Length=469
Score E
Sequences producing significant alignments: (Bits) Value
seq57912 457 3e-126
>seq57912
Length=4052
Score = 457 bits (506), Expect = 3e-126
Identities = 310/348 (89%), Gaps = 0/348 (0%)
Strand=Plus/Plus
Query 122 TACGGCGCCAAGGTGGTGCTGTCAGACAGCCGCCTCGGTAACAATTCCTACGGCGAAAAG 181
||||| ||||||||||||||||| ||||||||||| || ||||| || |||||||||||
Sbjct 1 TACGGGGCCAAGGTGGTGCTGTCGGACAGCCGCCTGGGCAACAACTCTCACGGCGAAAAG 60
Query 182 TGCCTGGAACTGCAACTGGAAAACCCCAGCTACGTGATGCTCAACCAGCAACGCAATGGC 241
||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 61 TGCATGGAACTGCAGCTGGAAAACCCCAGCTACGTGATGCTCAACCAGCAGCGCAACGGC 120
Query 242 GCCAACCCGCAAACCCACCGCGACACCACCGCACCCGAGATCCTGCGCGCTTTTGGTGAG 301
|||||||| || ||||| ||||||||||||||||| || |||||||| || || ||||||
Sbjct 121 GCCAACCCACAGACCCATCGCGACACCACCGCACCGGAAATCCTGCGTGCCTTCGGTGAG 180
Query 302 CGGCGCGTGGACTACTTCGTCAGCGGCATCGGCACCGGTGGCCACATCACCGGCATCGGC 361
| ||||| |||||||| |||||||||||||||||||| || || ||||| ||||||||
Sbjct 181 CTGCGCGCCGACTACTTTGTCAGCGGCATCGGCACCGGGGGGCATATCACTGGCATCGGT 240
Query 362 GAAACCCTCAAGGCCGCCTGGCCGGAGCTGCGCGTCATGGGCGTGGAGCCGGAAGAGTGC 421
|||||||| || |||||||||||| | || ||||||||||||||||| ||||||||||||
Sbjct 241 GAAACCCTGAAAGCCGCCTGGCCGCAACTACGCGTCATGGGCGTGGAACCGGAAGAGTGC 300
Query 422 GACCTGCTGAAAAACCAGCACGCGCCGCACCATATCCAGGGCCTGTCG 469
||||||||||||||||||||||| ||||| || || ||||||||||||
Sbjct 301 GACCTGCTGAAAAACCAGCACGCACCGCATCACATTCAGGGCCTGTCG 348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1396547455616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |