Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001999.1
Length=541
Score E
Sequences producing significant alignments: (Bits) Value
seq105819 268 3e-69
>seq105819
Length=24683
Score = 268 bits (296), Expect = 3e-69
Identities = 208/248 (84%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 282 CGCCAGTTCCTGCCACAGGGCGATGGTCTCGTCATCCGCCTGCTTGGGCATTACTGCCTT 341
||||| ||||||||| || ||| ||| || || ||| |||||||| || ||||
Sbjct 20472 CGCCAACGCCTGCCACAACGCCTTGGCCTCTTCGTCGACCTCTTTGGGCATCACCACCTT 20531
Query 342 GAGCTGGATGTACAGGAAACCTCGCTCCCCAGCCTTGTTCAGCAAGCCATGGCCCTTGGC 401
|||||| || ||||||| || |||||||| |||||||||||||||||||||||||||
Sbjct 20532 GAGCTGAATAAACAGGAAGCCGCGCTCCCCGCTCTTGTTCAGCAAGCCATGGCCCTTGGC 20591
Query 402 GCGCATGCGCTGGCCGTTCTGGCTGCCGGCCGGCACCTTGAGGTTGATCTTGCCGGTCAG 461
|||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 20592 GCGCATACGCTGGCCGTTCTGGCTGCCAGCAGGCACCTTGAGGTTGATCTTGCCGGTCAG 20651
Query 462 GGTCGGCACGGCCACTTCGGCGCCCAGCGCCAGTTCCCACGGTGCCAGTGGCAAGGTGAT 521
|||||||| |||||||| | ||||| ||||| |||||||||||||| |||| |||||
Sbjct 20652 CGTCGGCACAGCCACTTCCGTGCCCAACGCCAACTCCCACGGTGCCAGGGGCACTGTGAT 20711
Query 522 CACCAGGT 529
|||| ||
Sbjct 20712 TACCAAGT 20719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1626642230912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |