Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= AAMG01002002.1 Length=198 Score E Sequences producing significant alignments: (Bits) Value seq58572 250 3e-64 >seq58572 Length=4186 Score = 250 bits (276), Expect = 3e-64 Identities = 160/173 (92%), Gaps = 1/173 (1%) Strand=Plus/Minus Query 1 TGCTGACCAACATCGCCCGCCTGATGGACAAGGAAGGCAAGGTGTTGACCGGCTTCGACC 60 || |||||||||||||| || ||||||||||||||||||||||| |||| ||||| |||| Sbjct 1602 TGTTGACCAACATCGCCGGCTTGATGGACAAGGAAGGCAAGGTGCTGACTGGCTT-GACC 1544 Query 61 ACGCAACAAGTGGACGACCTGATCGCCGACGGCACCATCTACGGCGGCATGCTGCCGAAG 120 ||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| Sbjct 1543 ACGCAACAAGTGGACGAGTTGATCGCTGACGGCACCATCTACGGTGGCATGCTGCCGAAG 1484 Query 121 ATCCGTTGCGCACTGGAAGCAGTGCAAGGCGGCGTGGGCAGCTCGCTGATCCT 173 ||||||||||| |||||||| ||||||||||||||||| |||||||||||||| Sbjct 1483 ATCCGTTGCGCGCTGGAAGCGGTGCAAGGCGGCGTGGGAAGCTCGCTGATCCT 1431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533714171748