Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01002003.1
Length=209
Score E
Sequences producing significant alignments: (Bits) Value
seq63530 105 8e-21
>seq63530
Length=5081
Score = 105 bits (116), Expect = 8e-21
Identities = 153/208 (74%), Gaps = 6/208 (3%)
Strand=Plus/Minus
Query 1 CAAACAGCACGCGCACGTAGCGGCCCGAGGTCTTCGGGGCCGGTCCACAGGCCACCGGCG 60
||||||||| ||||||| ||| |||||| ||||| || ||||| || ||||||
Sbjct 4985 CAAACAGCATCTGCACGTAATGGCT-GAGGTCCCTGGGGCTGGCCCACAAACCGCCGGCG 4927
Query 61 GCGAGGTCACGCACCCGGGGGTCGGTGCCGGCCTTCGCCATCCTCGTAGCCGTGGGCGCG 120
|||| ||| |||| | | ||||||| ||| |||| |||| ||||| ||||||||
Sbjct 4926 GCGATGTCGCGCAGTTGCGCATCGGTGCTGGCGA-CGCCTTCCTGATAGCCCTGGGCGCG 4868
Query 121 ATAGCTCATTTCGCGCACCGGTACCCAGGAAACTCGGACTGGTTCATTTCGCAAGGGTGT 180
||||| |||| ||||| | || || | || ||| | |||| ||| || || ||| |
Sbjct 4867 ATAGCCGATTT-GCGCAGCCGTCCCGACAAAGCTC-GCGTGGTCCATCTC-CAGCGGTTT 4811
Query 181 GAGCAGGCTGCTTTCGTAACTGGGCTTC 208
|||||||||| | | | | |||||||||
Sbjct 4810 GAGCAGGCTG-TGTTGCAGCTGGGCTTC 4784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 568868997432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |