Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01002055.1
Length=294
Score E
Sequences producing significant alignments: (Bits) Value
seq28267 482 4e-134
>seq28267
Length=2022
Score = 482 bits (534), Expect = 4e-134
Identities = 284/294 (97%), Gaps = 1/294 (0%)
Strand=Plus/Minus
Query 1 TCGAGCAACGCCAGGAGACCACAGACGGCAACGGCGATGACCAGCAACAGCGGGAAATTT 60
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 1537 TCGAGCAACGCCAGGAGACCGCAAACGGCAACGGCGATGACCAGCAACAGCGGGAAATTT 1478
Query 61 AGCGACATAGGACCTAACTATCCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATT 120
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 1477 AGCGACATAGGACCTAACTATCCAACCTGAGCACCGCAAGGAAGGCTTCTT-GTGGAACT 1419
Query 121 TCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTG 180
|||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1418 TCCACGTTACCTACTTGCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTG 1359
Query 181 CGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1358 CGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGTGCCTTG 1299
Query 241 ACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGCGGCCTGGATCGCGACGTCG 294
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1298 ACGGAGGTCCGCGCAATGATCTGCCCGCCGATGGCGGCCTGGATCGCTACGTCG 1245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 840519923172
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |