Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq28267 482 4e-134 >seq28267 Length=2022 Score = 482 bits (534), Expect = 4e-134 Identities = 284/294 (97%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TCGAGCAACGCCAGGAGACCACAGACGGCAACGGCGATGACCAGCAACAGCGGGAAATTT 60 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 1537 TCGAGCAACGCCAGGAGACCGCAAACGGCAACGGCGATGACCAGCAACAGCGGGAAATTT 1478 Query 61 AGCGACATAGGACCTAACTATCCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATT 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct 1477 AGCGACATAGGACCTAACTATCCAACCTGAGCACCGCAAGGAAGGCTTCTT-GTGGAACT 1419 Query 121 TCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTG 180 |||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1418 TCCACGTTACCTACTTGCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTG 1359 Query 181 CGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTG 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1358 CGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGTGCCTTG 1299 Query 241 ACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGCGGCCTGGATCGCGACGTCG 294 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 1298 ACGGAGGTCCGCGCAATGATCTGCCCGCCGATGGCGGCCTGGATCGCTACGTCG 1245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 840519923172