Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= AAMG01002094.1 Length=130 Score E Sequences producing significant alignments: (Bits) Value seq97821 170 1e-40 >seq97821 Length=19066 Score = 170 bits (188), Expect = 1e-40 Identities = 115/129 (89%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 2 ccccccGACCTTAGTGATCACGCCGTTCCCGTGCAGCCGTTGGCGCGTACCTACCCGCGT 61 || |||||||| |||||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct 2392 CCTCCCGACCTCAGTGATCACGCCGTCCCCGTGCAGCCCTTGGCGCGTACCTATCCGCGT 2333 Query 62 GGGTTGTACGTAGAACCGCACAGCCACGATTGGGGCCAGTTGCTCTACGCCATGAGCGGT 121 || ||||||| || || |||||||| || |||||||| |||||||||||||||||||| Sbjct 2332 GGACTGTACGTTGAGCCCCACAGCCATGACTGGGGCCAATTGCTCTACGCCATGAGCGGC 2273 Query 122 GTGATGTGG 130 ||||||||| Sbjct 2272 GTGATGTGG 2264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 319602572000