Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= AAMG01002196.1 Length=286 Score E Sequences producing significant alignments: (Bits) Value seq110703 196 8e-48 >seq110703 Length=29075 Score = 196 bits (216), Expect = 8e-48 Identities = 156/188 (83%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 99 CCACAATCTGGAGCCAAGGCCACCGCTCCTGATAACTCCTGGCCTTGCGCGCAAACAATT 158 |||| ||| | ||||||||||| ||| |||||||||| |||||||| |||||||||| Sbjct 22806 CCACGATCCGCAGCCAAGGCCAGCGCGCCTGATAACTTCTGGCCTTCTGCGCAAACAACG 22747 Query 159 CCGGCTCCGGGTGCAACGGGTTGATCCGCAGCACACCCTGCTCCACATCCACCAAGCCAT 218 | |||||||| |||| ||||||||| |||||||| ||||| | | || |||| |||| Sbjct 22746 CTGGCTCCGGATGCAGCGGGTTGATGCGCAGCACGCCCTGTGCGATGTCTTCCAACCCAT 22687 Query 219 ACGGCGCATACACCTCGCCCGTCGCCACTTCCAGGCCAATACAGGTGCCCGCCACCAGGT 278 |||||||||||| ||||||||| || | |||||||| || ||||||||||||||||| | Sbjct 22686 ACGGCGCATACAACTCGCCCGTGGCAATCTCCAGGCCGATGCAGGTGCCCGCCACCAGAT 22627 Query 279 AGCGGTCG 286 | |||||| Sbjct 22626 ACCGGTCG 22619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 814952777220