Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01002205.1
Length=300
Score E
Sequences producing significant alignments: (Bits) Value
seq70371 452 7e-125
>seq70371
Length=7021
Score = 452 bits (500), Expect = 7e-125
Identities = 267/277 (96%), Gaps = 1/277 (0%)
Strand=Plus/Minus
Query 24 TTCGATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGAAGGTCCATGTGCACGTCGGC 83
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 4825 TTCGATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGATGGTCCATGTGCATGTCGGC 4766
Query 84 AAGAATATTCGGCCACCGCAAGAGGATGGGTGACATACGCCTCGCCACTACGTCGGCGTT 143
||||||||| | ||||||||||||||||||||||||||||||| || ||||| |||||||
Sbjct 4765 AAGAATATTTG-CCACCGCAAGAGGATGGGTGACATACGCCTCACCGCTACGCCGGCGTT 4707
Query 144 GGCCGTCGTGGGCTTGTTCGGCGTAGAAATACGCTCGGCGAACCAGGTTGACCTGGTCTG 203
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 4706 GGCCGTCGTGGGCTTGTTCGGCGTAGAAATACGCTCGGCGGACCAGGTTGACCTGGTCTG 4647
Query 204 CGCCGAGGTAGGCCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAAAGTGTGAACTC 263
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4646 GGCCGAGGTAGGCCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAAAGTGTGAACTC 4587
Query 264 CTGCCGATGGCTGTGACCCCGCGCCGTGCTACGTCGA 300
|||||| ||||||||||||||||||||||||||||||
Sbjct 4586 CTGCCGTTGGCTGTGACCCCGCGCCGTGCTACGTCGA 4550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 856463885824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |