Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq3417 91.5 1e-16 seq2791 91.5 1e-16 seq3418 87.8 2e-15 seq140 87.8 2e-15 seq753 84.2 2e-14 >seq3417 Length=265768 Score = 91.5 bits (100), Expect = 1e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 184797 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 184856 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 184857 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 184891 >seq2791 Length=2666840 Score = 91.5 bits (100), Expect = 1e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 2570381 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 2570440 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 2570441 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 2570475 >seq3418 Length=161897 Score = 87.8 bits (96), Expect = 2e-15 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||||| ||||||||||| |||||||||| ||| ||||| || ||| | || Sbjct 107584 ACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGT 107643 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || ||| |||||||||||| ||||||||||||||| Sbjct 107644 ATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 107679 Score = 87.8 bits (96), Expect = 2e-15 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||||| ||||||||||| |||||||||| ||| ||||| || ||| | || Sbjct 142431 ACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGT 142372 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || ||| |||||||||||| ||||||||||||||| Sbjct 142371 ATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 142336 >seq140 Length=324460 Score = 87.8 bits (96), Expect = 2e-15 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||||| ||||||||||| |||||||||| ||| ||||| || ||| | || Sbjct 313364 ACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGT 313423 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || ||| |||||||||||| ||||||||||||||| Sbjct 313424 ATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 313459 Score = 87.8 bits (96), Expect = 2e-15 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||||| ||||||||||| |||||||||| ||| ||||| || ||| | || Sbjct 319098 ACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGT 319039 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || ||| |||||||||||| ||||||||||||||| Sbjct 319038 ATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 319003 Score = 84.2 bits (92), Expect = 2e-14 Identities = 77/96 (80%), Gaps = 1/96 (1%) Strand=Plus/Plus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||||| ||||||||||| |||||||||| ||| ||||| || ||| | || Sbjct 289205 ACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGT 289264 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || ||| |||||||||||| ||||||||||||||| Sbjct 289265 AT-GGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 289299 Score = 80.6 bits (88), Expect = 3e-13 Identities = 77/96 (80%), Gaps = 2/96 (2%) Strand=Plus/Minus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||||| ||||||||||| |||||||||| ||| ||||| || ||| | || Sbjct 322844 ACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGAC-ATGT 322786 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || ||| |||||||||||| ||||||||||||||| Sbjct 322785 ATGGGGC-TGACGCCTGCCCAGTGCCGGAAGGTTAA 322751 >seq753 Length=174684 Score = 84.2 bits (92), Expect = 2e-14 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| |||||||||| ||||||| || || |||||| || Sbjct 32977 GGTCGCAGTGACCAGGCCCGGCCGACTGTTTACCAAAAACATAGGTCTTTGCAAAGTCGT 33036 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| ||||||||||||||| Sbjct 33037 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 33082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476784212258