Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq3417 230 5e-58 seq1719 230 5e-58 seq3418 226 6e-57 seq140 226 6e-57 seq216 223 7e-56 seq2662 214 4e-53 seq2488 208 2e-51 seq1237 208 2e-51 seq298 199 8e-49 seq3056 187 5e-45 seq1026 172 1e-40 seq2942 152 1e-34 seq2735 141 2e-31 seq2749 111 3e-22 seq3069 109 1e-21 seq2647 105 1e-20 seq2606 104 5e-20 seq1436 104 5e-20 seq141 102 2e-19 seq205 80.6 6e-13 >seq3417 Length=265768 Score = 230 bits (254), Expect = 5e-58 Identities = 241/310 (78%), Gaps = 20/310 (6%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 60996 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 61054 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 61055 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 61114 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207 || ||||||||||||||| ||| ||| ||||||||||||||||||| ||| | || | | Sbjct 61115 ACTGATCGTCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCT 61174 Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| |||| | | | | | || | |||||||| Sbjct 61175 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAG 61220 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | |||||||| ||| | ||| || ||| ||||| ||| || || |||||||||| Sbjct 61221 CAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 61278 Query 326 GTCCGCCGCT 335 ||||||| || Sbjct 61279 GTCCGCCACT 61288 Score = 205 bits (226), Expect = 2e-50 Identities = 168/202 (83%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||||| ||| |||||| |||| ||||||| |||||||||||||||||||| |||||| Sbjct 195494 CCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCC 195437 Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136 |||||||||| ||||| |||||| || |||||||||||| |||||||| |||||||||| Sbjct 195436 CACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCG 195377 Query 137 CTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCG 196 ||||||| || | ||| | | |||||| |||| |||||| |||||||| ||||| | Sbjct 195376 AAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACT 195317 Query 197 ACCTAGGCTCATCTGATAGCGC 218 || ||||||||| | ||||| Sbjct 195316 ACGCAGGCTCATCAAACAGCGC 195295 >seq1719 Length=539293 Score = 230 bits (254), Expect = 5e-58 Identities = 241/310 (78%), Gaps = 20/310 (6%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 1432 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 1490 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 1491 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 1550 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207 || ||||||||||||||| ||| ||| ||||||||||||||||||| ||| | || | | Sbjct 1551 ACTGATCGTCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCT 1610 Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| |||| | | | | | || | |||||||| Sbjct 1611 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAG 1656 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | |||||||| ||| | ||| || ||| ||||| ||| || || |||||||||| Sbjct 1657 CAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 1714 Query 326 GTCCGCCGCT 335 ||||||| || Sbjct 1715 GTCCGCCACT 1724 >seq3418 Length=161897 Score = 226 bits (250), Expect = 6e-57 Identities = 240/310 (77%), Gaps = 20/310 (6%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 102303 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 102245 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 102244 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 102185 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | | Sbjct 102184 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCT 102125 Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| |||| | | | | | || | |||||||| Sbjct 102124 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAG 102079 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | |||||||| ||| | ||| || ||| ||||| ||| || || |||||||||| Sbjct 102078 CAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 102021 Query 326 GTCCGCCGCT 335 ||||||| || Sbjct 102020 GTCCGCCACT 102011 Score = 226 bits (250), Expect = 6e-57 Identities = 240/310 (77%), Gaps = 20/310 (6%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 147712 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 147770 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 147771 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 147830 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | | Sbjct 147831 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCT 147890 Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| |||| | | | | | || | |||||||| Sbjct 147891 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAG 147936 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | |||||||| ||| | ||| || ||| ||||| ||| || || |||||||||| Sbjct 147937 CAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 147994 Query 326 GTCCGCCGCT 335 ||||||| || Sbjct 147995 GTCCGCCACT 148004 >seq140 Length=324460 Score = 226 bits (250), Expect = 6e-57 Identities = 240/310 (77%), Gaps = 20/310 (6%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 308083 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 308025 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 308024 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 307965 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | | Sbjct 307964 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCT 307905 Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| |||| | | | | | || | |||||||| Sbjct 307904 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAG 307859 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | |||||||| ||| | ||| || ||| ||||| ||| || || |||||||||| Sbjct 307858 CAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 307801 Query 326 GTCCGCCGCT 335 ||||||| || Sbjct 307800 GTCCGCCACT 307791 Score = 219 bits (242), Expect = 9e-55 Identities = 236/309 (76%), Gaps = 20/309 (6%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 300599 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 300657 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 300658 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 300717 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCAT 208 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| || | | Sbjct 300718 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCT 300777 Query 209 CTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGC 268 | | || || ||| |||| | | | | | || | ||||||||| Sbjct 300778 C-------------CTCGGCGGATTCCTCCTTTTGCTCCTCAG-CCTACG-GGTATTAGC 300822 Query 269 GTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCCG 326 |||||||| ||| | ||| || ||| ||||| ||| || || ||||||||||| Sbjct 300823 AGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCCG 300880 Query 327 TCCGCCGCT 335 |||||| || Sbjct 300881 TCCGCCACT 300889 Score = 212 bits (234), Expect = 1e-52 Identities = 235/307 (77%), Gaps = 20/307 (7%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 || ||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 246588 CATGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 246646 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||| | Sbjct 246647 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGAACCAGCT 246706 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | | Sbjct 246707 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCT 246766 Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| |||| | | | | | || | |||||||| Sbjct 246767 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAG 246812 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | |||||||| || | ||| || ||| ||||| ||| || || |||||||||| Sbjct 246813 CAGCCGTTTCCAGCTATTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCTTTACTCACCC 246870 Query 326 GTCCGCC 332 ||||||| Sbjct 246871 GTCCGCC 246877 Score = 203 bits (224), Expect = 7e-50 Identities = 150/171 (88%), Gaps = 3/171 (2%) Strand=Plus/Minus Query 29 CACGC-GGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCT 87 ||||| ||||||| || |||||||||||||||||| || ||||||||||||||||| Sbjct 283988 CACGCCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCT 283930 Query 88 CCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGT 147 ||||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| Sbjct 283929 CCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGC 283870 Query 148 TACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 ||| |||| |||||||||| ||| ||| ||||| ||||||||||||| ||| Sbjct 283869 TACTGATCATCGCCTTGGTAAGCTATTGCCTCA-CAACTAGCTAATCAGAC 283820 >seq216 Length=811725 Score = 223 bits (246), Expect = 7e-56 Identities = 238/309 (77%), Gaps = 18/309 (6%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| | |||||||||||||||||| || |||||||||||||||||| Sbjct 440703 CACGCGGCATTGTTCCG-TCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 440761 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 440762 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 440821 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCAT 208 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | | Sbjct 440822 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGTGAGCCCCT 440881 Query 209 CTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGC 268 | | || | || ||| | || || || || | || | ||||||||| Sbjct 440882 C--------CTCGGGCGGA--TTCCTCCTTTTGCT-CCTCAG--CCTACGGGGTATTAGC 440928 Query 269 GTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCCG 326 |||||||| ||| | ||| || ||| ||||| ||| || || ||||||||||| Sbjct 440929 AGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCCG 440986 Query 327 TCCGCCGCT 335 |||||| || Sbjct 440987 TCCGCCACT 440995 >seq2662 Length=2557273 Score = 214 bits (236), Expect = 4e-53 Identities = 150/170 (88%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 763174 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 763232 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| ||||||||||| || |||||| | Sbjct 763233 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTTTCGGACCAGCT 763292 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| Sbjct 763293 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 763342 >seq2488 Length=232662 Score = 208 bits (230), Expect = 2e-51 Identities = 236/310 (76%), Gaps = 20/310 (6%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 117535 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 117593 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| ||||| || |||||||||||||| |||||| | Sbjct 117594 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTTTGGCTGATCATCCTCTCGGACCAGCT 117653 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207 || |||| ||||| |||| ||| ||| |||||||||| |||||||| || | || | | Sbjct 117654 ACTGATCATCGCCATGGTAAGCTATTGCCTCACCAACAAGCTAATCAAACGCGAGCCCCT 117713 Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| ||||| | | | | | || | |||||||| Sbjct 117714 CCT-----CG---GGC-----GGATTCCTCCTTTCGCTCCTCTG-CCTACGGGGTATTAG 117759 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | |||||||| ||| | ||| || ||| ||||| ||| || || |||||||| | Sbjct 117760 CAACCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACAC 117817 Query 326 GTCCGCCGCT 335 ||||||| || Sbjct 117818 GTCCGCCACT 117827 >seq1237 Length=2783542 Score = 208 bits (230), Expect = 2e-51 Identities = 149/170 (88%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||| ||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 1807617 CACGCGACATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 1807559 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 | |||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 1807558 CTGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 1807499 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| Sbjct 1807498 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 1807449 >seq298 Length=1896781 Score = 199 bits (220), Expect = 8e-49 Identities = 155/182 (85%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 |||||| ||| |||| ||||||| | | ||||||||||||||||| || |||||| Sbjct 52556 CCTTCTACCAC-CACGTGGCATTGCTTCG-TCAGGCTTTCGCCCATTTCGAAAAATTCCC 52499 Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136 |||||||||||||||||||||||||| || | ||||||| |||||||| ||||||||||| Sbjct 52498 CACTGCTGCCTCCCGTAGGAGTCTGGGCCTTATCTCAGTCCCAGTGTGGCTGATCATCCT 52439 Query 137 CTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCG 196 ||| |||||| ||| |||| |||||||||| ||| ||| ||||||||||||||||| | | Sbjct 52438 CTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAACAG 52379 Query 197 AC 198 || Sbjct 52378 AC 52377 >seq3056 Length=3263529 Score = 187 bits (206), Expect = 5e-45 Identities = 232/310 (75%), Gaps = 21/310 (7%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||| ||||||| || ||||||||||||||||||| || |||| ||||||||||||| Sbjct 3040776 CACGTGGCATTG-CTCCGTCAGGCTTTCGCCCATTGTGGAAAATTCTCCACTGCTGCCTC 3040834 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||| |||||| | || ||| ||||| |||||||| |||||||||||||| |||||| | Sbjct 3040835 TCGTAAGAGTCTAGGCCATGTATCAGT-CCAGTGTGGCTGATCATCCTCTCGGACCAGCT 3040893 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGA-CCTAGGCTCA 207 || |||| |||||||||| ||| ||| ||||||||||||||||||| || | || | | Sbjct 3040894 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGATGCGAGCCCCT 3040953 Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| |||| | | | | | || | |||||||| Sbjct 3040954 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAG 3040999 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | ||||||| ||| | ||| || ||| ||||| ||| || || |||||||||| Sbjct 3041000 CAGTCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 3041057 Query 326 GTCCGCCGCT 335 ||||||| || Sbjct 3041058 GTCCGCCACT 3041067 >seq1026 Length=3910466 Score = 172 bits (190), Expect = 1e-40 Identities = 141/170 (83%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||| | ||||| || |||||||||||||||||| || |||| ||||| |||||| Sbjct 3645016 CACGTGACATTG-CTCCGTCAGGCTTTCGCCCATTGCGAAAAATTCGTCACTGTTGCCTC 3644958 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 || ||||||||||| |||||||| ||| |||||| |||||||||||||| ||||| | Sbjct 3644957 CCTTAGGAGTCTGGGCCGTGTCTTAGTCTTAGTGTGGCTGATCATCCTCTCGGACCAACT 3644898 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| Sbjct 3644897 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 3644848 >seq2942 Length=2524843 Score = 152 bits (168), Expect = 1e-34 Identities = 109/123 (89%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 2156553 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 2156495 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAG-T 147 |||||||||||||| | |||||||||| |||||||| |||||||||||||| |||||| | Sbjct 2156494 CCGTAGGAGTCTGGGCTGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 2156435 Query 148 TAC 150 ||| Sbjct 2156434 TAC 2156432 Score = 77.0 bits (84), Expect = 7e-12 Identities = 84/109 (77%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 7 AATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTC 66 || ||| || |||||| || | || |||||| | || |||| |||||||| ||||| Sbjct 20268 AACCCGTAGGCCTTCTATCTC-CATGCGGCAGTA-CTCCATCATGCTTTCGCTCATTGCG 20211 Query 67 CAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 115 || ||| || ||| | ||||||| ||||||| ||| |||||||||||| Sbjct 20210 AAAAATTACCTACTACGGCCTCCCATAGGAGTTTGGGCCGTGTCTCAGT 20162 >seq2735 Length=2210169 Score = 141 bits (156), Expect = 2e-31 Identities = 217/309 (70%), Gaps = 44/309 (14%) Strand=Plus/Minus Query 30 ACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCC 89 ||||||||||| || |||||||||||||||||| || ||||||||||||||||||| Sbjct 890029 ACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCC 889971 Query 90 CGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTA 149 ||||||||||||| |||||||||||| | |||||| ||||||| Sbjct 889970 CGTAGGAGTCTGGGCCGTGTCTCAGTCCTAGTGTGGCTGATCA----------------- 889928 Query 150 CGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCAT 208 |||||||||| ||| ||| ||||||||||||| ||||| ||| | || | | Sbjct 889927 -------TCGCCTTGGTAAGCTATTGCCTCACCAACTAGTTAATCAGACGCGAGCCCCTC 889875 Query 209 CTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGC 268 || || ||| || ||| |||| | | | | | || | ||||||||| Sbjct 889874 CT-----CG---GGC-----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAGC 889829 Query 269 GTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCCG 326 |||||||| ||| | ||| || ||| ||||| ||| || || ||||||||||| Sbjct 889828 AGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCCG 889771 Query 327 TCCGCCGCT 335 |||||| || Sbjct 889770 TCCGCCACT 889762 >seq2749 Length=1536929 Score = 111 bits (122), Expect = 3e-22 Identities = 78/89 (88%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 75 CCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| |||||||||||||||||| ||||||||| | |||||||| ||||||||| Sbjct 492611 CCCACTGCTACCTCCCGTAGGAGTCTGGGTCGTGTCTCAATCCCAGTGTGGCTGATCATC 492670 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTT 163 ||||| |||||| ||| |||| || |||| Sbjct 492671 CTCTCGGACCAGCTACTGATCATCTCCTT 492699 >seq3069 Length=10854949 Score = 109 bits (120), Expect = 1e-21 Identities = 104/132 (79%), Gaps = 7/132 (5%) Strand=Plus/Minus Query 68 AATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACT 127 || |||| |||| |||| ||||||| ||||||| |||| ||||| |||||||| | Sbjct 7315984 AAAATTCTTCACTACTGCTTCCCGTAAAAGTCTGGGCCGTATCTCA--TCCAGTGTAGTT 7315927 Query 128 GATCATCCTCTC-----AGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACC 182 |||||||||||| ||||||| ||| |||| | |||||||| | | ||| ||||||| Sbjct 7315926 GATCATCCTCTCGGACCAGACCAGCTACTGATCATTGCCTTGGTAAACTATTGCCTCACC 7315867 Query 183 AACTAGCTAATC 194 ||||||||||| Sbjct 7315866 GACTAGCTAATC 7315855 >seq2647 Length=4788780 Score = 105 bits (116), Expect = 1e-20 Identities = 161/224 (72%), Gaps = 19/224 (8%) Strand=Plus/Plus Query 115 TTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATT 174 ||| || || |||||||||||||| |||||| ||| |||| |||||||||| ||| ||| Sbjct 2201546 TTCAAGCCTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 2201605 Query 175 ACCTCACCAACTAGCTAATCCGAC-CTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCC 233 ||||||||||||||||||| ||| | || | | || || ||| || Sbjct 2201606 GCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCT-----CG---GGC-----GGATT 2201652 Query 234 CCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCA 293 ||| |||| | | | | | || | ||||||||| |||||||| ||| | ||| Sbjct 2201653 CCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCC-- 2201709 Query 294 CTACCA--GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 || ||| ||||| ||| || || ||||||||||||||||| || Sbjct 2201710 CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCCGTCCGCCACT 2201753 >seq2606 Length=52945 Score = 104 bits (114), Expect = 5e-20 Identities = 162/225 (72%), Gaps = 25/225 (11%) Strand=Plus/Minus Query 117 CCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTAC 176 ||| |||| |||||||||||||| ||||| ||| |||| |||||||||| ||| ||| | Sbjct 47642 CCATTGTGGCTGATCATCCTCTCGAACCAGCTACTGATCATCGCCTTGGTAAGCTATTGC 47583 Query 177 CTCACCAACTAGCTAATCCGAC-CTAG--GCTCATCTGATAGCGCAAGGCCCGAAGGTCC 233 |||||||||||||||||| ||| | || ||| |||| ||| | ||| Sbjct 47582 CTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCTG---GCGGA----------TTCC 47536 Query 234 -CCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCC 292 ||| ||| | || || | || | ||||||||| ||||||| ||| | ||| Sbjct 47535 TCCT--TTTGTTCCTCAG--CCTACGGGGTATTAGCAGCCGTTTCTAGCTGTTGTTCCC- 47481 Query 293 ACTACCA--GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 || ||| ||||| ||| || || ||||||||||||||||| || Sbjct 47480 -CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCCGTCCGCCACT 47437 >seq1436 Length=1249242 Score = 104 bits (114), Expect = 5e-20 Identities = 162/225 (72%), Gaps = 25/225 (11%) Strand=Plus/Minus Query 117 CCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTAC 176 ||| |||| |||||||||||||| ||||| ||| |||| |||||||||| ||| ||| | Sbjct 16087 CCATTGTGGCTGATCATCCTCTCGAACCAGCTACTGATCATCGCCTTGGTAAGCTATTGC 16028 Query 177 CTCACCAACTAGCTAATCCGAC-CTAG--GCTCATCTGATAGCGCAAGGCCCGAAGGTCC 233 |||||||||||||||||| ||| | || ||| |||| ||| | ||| Sbjct 16027 CTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCTG---GCGGA----------TTCC 15981 Query 234 -CCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCC 292 ||| ||| | || || | || | ||||||||| ||||||| ||| | ||| Sbjct 15980 TCCT--TTTGTTCCTCAG--CCTACGGGGTATTAGCAGCCGTTTCTAGCTGTTGTTCCC- 15926 Query 293 ACTACCA--GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 || ||| ||||| ||| || || ||||||||||||||||| || Sbjct 15925 -CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCCGTCCGCCACT 15882 >seq141 Length=78972 Score = 102 bits (112), Expect = 2e-19 Identities = 123/166 (74%), Gaps = 1/166 (1%) Strand=Plus/Minus Query 31 CGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCC 90 |||||| ||| || || ||||||||||| ||| |||||| |||||||||||| Sbjct 59760 CGCGGCCTTG-CTCCGTCCGGCTTTCGCCCCTTGCGGCCCCTTCCCCCCTGCTGCCTCCC 59702 Query 91 GTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTAC 150 || || |||||| ||||||||| || || ||||| ||| || ||||||| | || | | | Sbjct 59701 GTCGGCGTCTGGGCCGTGTCTCCGTCCCCGTGTGGCTGCTCCTCCTCTCGGCCCCGCTCC 59642 Query 151 GGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCG 196 | || |||||||||| || || |||| || || ||| |||| Sbjct 59641 TGCTCCTCGCCTTGGTCCGCTCTTGCCTCCCCCCCTCGCTCCTCCG 59596 >seq205 Length=1758211 Score = 80.6 bits (88), Expect = 6e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 47 TCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGA 103 |||||||||||||||||||| || |||||||| |||| |||||||||||||||||| Sbjct 479335 TCAGGCTTTCGCCCATTGTCGAAAATTCCCCATTGCTATCTCCCGTAGGAGTCTGGA 479391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071963359040