Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq3418 219 1e-54 seq140 219 1e-54 seq1576 185 2e-44 seq3321 156 1e-35 seq1956 147 5e-33 seq2780 138 3e-30 seq3417 102 2e-19 seq141 82.4 2e-13 >seq3418 Length=161897 Score = 219 bits (242), Expect = 1e-54 Identities = 307/414 (74%), Gaps = 15/414 (4%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| | Sbjct 106598 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTT-TC 106542 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || |||| ||| ||||||||| ||| | || |||| | || | || Sbjct 106541 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGCCCATAAGC-AGT 106486 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | |||||| |||||||||||| ||||| | |||| | ||| |||| | Sbjct 106485 GACAATT-GCCCTATGAAGACTCGCTTT-CGCTATGGCTCCGGTGGGTTCCCTTAACCAA 106428 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | | || Sbjct 106427 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAG--AGCCCAGG 106371 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| || |||||||||| | ||||||||||||||| || ||||| Sbjct 106370 CTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGCTG-GGGGT 106312 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| || |||||||||||||||| ||| |||||||||| ||| |||||||||||| Sbjct 106311 TCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCT 106252 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || | | |||||| | ||||| || || | ||||| || | ||||||| Sbjct 106251 TGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 106198 Score = 219 bits (242), Expect = 1e-54 Identities = 307/414 (74%), Gaps = 15/414 (4%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| | Sbjct 143417 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTT-TC 143473 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || |||| ||| ||||||||| ||| | || |||| | || | || Sbjct 143474 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGCCCATAAGC-AGT 143529 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | |||||| |||||||||||| ||||| | |||| | ||| |||| | Sbjct 143530 GACAATT-GCCCTATGAAGACTCGCTTT-CGCTATGGCTCCGGTGGGTTCCCTTAACCAA 143587 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | | || Sbjct 143588 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAG--AGCCCAGG 143644 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| || |||||||||| | ||||||||||||||| || ||||| Sbjct 143645 CTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGCTG-GGGGT 143703 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| || |||||||||||||||| ||| |||||||||| ||| |||||||||||| Sbjct 143704 TCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCT 143763 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || | | |||||| | ||||| || || | ||||| || | ||||||| Sbjct 143764 TGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 143817 >seq140 Length=324460 Score = 219 bits (242), Expect = 1e-54 Identities = 307/414 (74%), Gaps = 15/414 (4%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| | Sbjct 312378 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTT-TC 312322 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || |||| ||| ||||||||| ||| | || |||| | || | || Sbjct 312321 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGCCCATAAGC-AGT 312266 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | |||||| |||||||||||| ||||| | |||| | ||| |||| | Sbjct 312265 GACAATT-GCCCTATGAAGACTCGCTTT-CGCTATGGCTCCGGTGGGTTCCCTTAACCAA 312208 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | | || Sbjct 312207 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAG--AGCCCAGG 312151 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| || |||||||||| | ||||||||||||||| || ||||| Sbjct 312150 CTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGCTG-GGGGT 312092 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| || |||||||||||||||| ||| |||||||||| ||| |||||||||||| Sbjct 312091 TCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCT 312032 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || | | |||||| | ||||| || || | ||||| || | ||||||| Sbjct 312031 TGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 311978 Score = 219 bits (242), Expect = 1e-54 Identities = 307/414 (74%), Gaps = 15/414 (4%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| | Sbjct 320082 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTT-TC 320138 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || |||| ||| ||||||||| ||| | || |||| | || | || Sbjct 320139 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGCCCATAAGC-AGT 320194 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | |||||| |||||||||||| ||||| | |||| | ||| |||| | Sbjct 320195 GACAATT-GCCCTATGAAGACTCGCTTT-CGCTATGGCTCCGGTGGGTTCCCTTAACCAA 320252 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | | || Sbjct 320253 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAG--AGCCCAGG 320309 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| || |||||||||| | ||||||||||||||| || ||||| Sbjct 320310 CTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGCTG-GGGGT 320368 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| || |||||||||||||||| ||| |||||||||| ||| |||||||||||| Sbjct 320369 TCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCT 320428 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || | | |||||| | ||||| || || | ||||| || | ||||||| Sbjct 320429 TGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 320482 Score = 215 bits (238), Expect = 1e-53 Identities = 306/414 (74%), Gaps = 15/414 (4%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| | Sbjct 242331 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTT-TC 242387 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || |||| ||| ||||||||| ||| | || |||| | || | || Sbjct 242388 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGCCCATAAGC-AGT 242443 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | |||||| |||||||||||| ||||| | |||| | ||| |||| | Sbjct 242444 GACAATT-GCCCTATGAAGACTCGCTTT-CGCTATGGCTCCGGTGGGTTCCCTTAACCAA 242501 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | |||| | ||| ||| |||| |||| | | || Sbjct 242502 -GCCACTGCCTATGAGTCGCCTGCTCATTCTTCAACAGGCACGCGGTCAG--AGCCCAGG 242558 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| || |||||||||| | ||||||||||||||| || ||||| Sbjct 242559 CTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGCTG-GGGGT 242617 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| || |||||||||||||||| ||| |||||||||| ||| |||||||||||| Sbjct 242618 TCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACACAGGAGTATTTAGCCT 242677 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || | | |||||| | ||||| || || | ||||| || | ||||||| Sbjct 242678 TGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 242731 Score = 190 bits (210), Expect = 5e-46 Identities = 278/375 (74%), Gaps = 20/375 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| || |||||| ||||||||||| |||||| ||||| | Sbjct 288225 CCACAACTCAT--CGCTA--TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTT-TC 288171 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || |||| ||| ||||||||| ||| | || |||| | || | || Sbjct 288170 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGCCCATAAGC-AGT 288115 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA---TTCGGTTAAGCT 185 ||| | |||||| |||||||||||| ||||| | |||| | ||| |||| | Sbjct 288114 GACAATT-GCCCTATGAAGACTCGCTTT-CGCTATGGCTCCGCGTGGGTTCCCTTAACCA 288057 Query 186 TTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCA-GTCACCCAACAAA 244 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | | | Sbjct 288056 A-GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGCGTCAG--AGCCCA 288000 Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304 | ||||||||||||| || |||||||||| | |||||||||||||| || ||| Sbjct 287999 GGCTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCG-CTG-GGG 287942 Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 ||||||||| || ||||||||| |||||| ||| |||||||||| ||| |||||||||| Sbjct 287941 GTTCTTTTCACCCTTCCCTCACCGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGC 287882 Query 365 CTTGGAGGATGGTCC 379 |||| | | |||||| Sbjct 287881 CTTGCAAGGTGGTCC 287867 Score = 178 bits (196), Expect = 3e-42 Identities = 302/416 (73%), Gaps = 25/416 (6%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| || Sbjct 323823 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCACTTTAGT--TT 323878 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||| ||| || |||| ||| ||||||||| ||| | || |||| | || ||| Sbjct 323879 CACCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGCC-ATA----AGC 323930 Query 129 -GACTAGACGCCCTAGTAAG-ACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGC 184 ||| | |||||| ||| ||||||||| ||||| | |||| | ||| |||| | Sbjct 323931 TGACAATT-GCCCTATGAAGGACTCGCTTT-CGCTATGGCTCCGGTGGGTTCCCTTAACC 323988 Query 185 TTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAA 244 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | | Sbjct 323989 AA-GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAG---AGCCA 324044 Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304 | ||||||||||||| || |||||||||| | ||||||||||||||| || ||| Sbjct 324045 GGCTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGCTG-GGG 324103 Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 ||||||||| || |||||||||||||||| ||| |||||||||| ||| |||||||||| Sbjct 324104 GTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGC 324163 Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||| | | | |||| | ||||| || || | ||||| || | ||||||| Sbjct 324164 CTTGCAAGGT-GTCCTTGCTGATTCACACGGGATTCCACGTGC-CCATGCTACTCG 324217 >seq1576 Length=5940209 Score = 185 bits (204), Expect = 2e-44 Identities = 307/423 (73%), Gaps = 24/423 (6%) Strand=Plus/Plus Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63 |||| ||||| |||| ||||| | || |||||| |||||||||| |||||| |||| Sbjct 5844039 CCGAACCACAACTCAT-CCGCTGAATTCTTCAACATCAGTCGGTTCGTACCTCCACTTAG 5844097 Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123 | | |||||| ||| || |||| ||| ||||||||| ||| | || |||| | || Sbjct 5844098 TT-TCACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGCCCATAAG 5844153 Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTA 181 | || ||| | |||||| |||||| ||||| ||||| |||| | ||| ||| Sbjct 5844154 C-AGTGACAATT-GCCCTATGAAGACTTGCTTT-CGCTATAGCTCCGGTGGGTTCCCTTA 5844210 Query 182 AGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCA---CCC 238 | | ||||||| || |||||| | | |||| | ||| ||| |||| |||| ||| Sbjct 5844211 ACCAA-GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGCCC 5844269 Query 239 AACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTC 298 | || ||||| ||||||| || |||||||||| | ||||||||||||||| Sbjct 5844270 AT----GTTC-CTCCCGCTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCAT 5844324 Query 299 TCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTA 358 | ||||||||| | || |||||||||||||||| ||| ||||||||| ||| |||| Sbjct 5844325 TG-GGGGTTCTT--CACCCTTCCCTCACGGTACTACTTCGATATCGGTCACCCAGGAGTA 5844381 Query 359 TTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCT-CGTGCTCCGTCCTAC 417 |||||||||| | | |||||| | ||||| || | |||| ||||| || | |||| Sbjct 5844382 TTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACAC-GGGATTCTACGTGCCCCATGCTAC 5844440 Query 418 TCG 420 ||| Sbjct 5844441 TCG 5844443 Score = 179 bits (198), Expect = 9e-43 Identities = 301/415 (73%), Gaps = 19/415 (5%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| |||||||||| |||||| ||||| | Sbjct 5836465 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGTACCTCCACTTAGTT-TC 5836521 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || |||| ||| ||||||||| ||| | || |||| | || | || Sbjct 5836522 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGCCCATAAGC-AGT 5836577 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | |||||| |||||| ||||| ||||| | |||| | ||| |||| | Sbjct 5836578 GACAATT-GCCCTATGAAGACTTGCTTT-CGCTATGGCTCCGGTGGGTTCCCTTAACCAA 5836635 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | | || Sbjct 5836636 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAG--AGCCCAGG 5836692 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| || || ||||||| | ||||||||||||||| | ||||| Sbjct 5836693 CTCCTCCCACTGCTTGGGAGCTTATGGTTTCATGTTCTATTTCACTCCCCGTTG-GGGGT 5836751 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 |||| | || |||||||||||||||| ||| |||||| ||| ||| || ||||||||| Sbjct 5836752 TCTT--CACCCTTCCCTCACGGTACTACTTCGCTATCGATCACCCAGGAGCATTTAGCCT 5836809 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCT-CGTGCTCCGTCCTACTCG 420 || | | |||||| | ||||| || | |||| ||||| || | ||||||| Sbjct 5836810 TGCAAGGTGGTCCTTGCTGATTCACAC-GGGATTCTACGTGCCCCATGCTACTCG 5836863 >seq3321 Length=7168875 Score = 156 bits (172), Expect = 1e-35 Identities = 209/286 (73%), Gaps = 6/286 (2%) Strand=Plus/Plus Query 137 GCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTTTGCCACTG 194 |||||| |||||||||||| ||||| |||| | ||| ||| | |||||| Sbjct 6549351 GCCCTATGAAGACTCGCTTT-CGCTATAGCTCCGGTGGGTTCCCGTAAACCAAGCCACTC 6549409 Query 195 AAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCC 254 || |||||| | | |||| | ||| ||| |||| |||| | | || ||||| Sbjct 6549410 CCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAG--AGCCCAGGTTCCTCCC 6549467 Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCG 314 |||||||| || ||||||| || | ||||||||||||||| || |||||||||||| Sbjct 6549468 ACTGCTTGGGAGCTTACGGTTACATGTTCTATTTCACTCCCCGCTG-GGGGTTCTTTTCA 6549526 Query 315 CCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGAT 374 || |||||||||||||||| || |||||||||| ||| |||||||||||||| | | | Sbjct 6549527 CCCTTCCCTCACGGTACTACTTTGCTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGT 6549586 Query 375 GGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 ||||| | ||||| || || | ||||| || | ||||||| Sbjct 6549587 GGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 6549632 >seq1956 Length=1184124 Score = 147 bits (162), Expect = 5e-33 Identities = 237/331 (72%), Gaps = 10/331 (3%) Strand=Plus/Plus Query 92 AGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTC 151 |||||||||| ||| | ||| ||| | || | || ||| | |||||| ||||||| Sbjct 830615 AGGATAGATCACCCAGGTTT-GGGCCCATAAGC-AGTGACAATT-GCCCTATGAAGACTC 830671 Query 152 GCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGA 209 ||||| | ||| | |||| | ||| |||| | ||||||| || |||||| | Sbjct 830672 GCTTT-CACTATGGCTCCGGTGGGTTCCCTTAACCAA-GCCACTGCCTATGAGTCGCCGG 830729 Query 210 CCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCAT 269 | |||| | ||| ||| |||| ||| | | || ||| | ||||||| || | Sbjct 830730 CTCATTCTTCAACAGGCACGCGATCAG--AGCCCAGGCTCCTCTCGCTGCTTGGGAGCTT 830787 Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| ||||||||||||||| || |||||||||||| || || ||||||||| Sbjct 830788 ACGGTTTCATATTCTATTTCACTCCCCGCTG-GGGGTTCTTTTCACCCTTTCCTCACGGT 830846 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTC 389 | || ||| |||||||||| ||| |||||||||||||| | | |||||| | |||| Sbjct 830847 ATTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTC 830906 Query 390 AGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 | || || | ||||| || | ||||||| Sbjct 830907 ACACGGGATTCCACGTGCCCCATGCTACTCG 830937 >seq2780 Length=521479 Score = 138 bits (152), Expect = 3e-30 Identities = 136/174 (78%), Gaps = 5/174 (3%) Strand=Plus/Minus Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309 ||||||||||||| || |||||||||| | ||||||||||||||| || |||||||| Sbjct 116506 CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGCT--GGGGTTCT 116449 Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTG- 368 |||| || ||||||||| ||||| |||||||||||||| ||| | |||||||||||| Sbjct 116448 TTTCACCCTTCCCTCACAATACTACTTCACTATCGGTCATCCAGGAATATTTAGCCTTGC 116389 Query 369 --GAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 | | |||||| | ||||| | | | || | ||||| || | ||||||| Sbjct 116388 AATAAGGTGGTCCTTGCTGATTCACATAGAATTCCACGTGCCCCATGCTACTCG 116335 >seq3417 Length=265768 Score = 102 bits (112), Expect = 2e-19 Identities = 102/130 (78%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| ||||| | | ||||| ||| ||| ||||||| | |||||||||| Sbjct 183385 ACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCC-TAAATAGGGTTCTTTT 183327 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | |||||||||||||||||| || | |||||||||| | || | || |||| ||| |||| Sbjct 183326 CACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGG 183267 Query 373 ATGGTCCCCC 382 ||||||||| Sbjct 183266 GTGGTCCCCC 183257 >seq141 Length=78972 Score = 82.4 bits (90), Expect = 2e-13 Identities = 97/130 (75%), Gaps = 1/130 (1%) Strand=Plus/Minus Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309 ||||| ||||||| ||| | ||||||| | ||| |||| |||||| || |||||||| Sbjct 63815 CTCCCCCTGCTTGGGCGCTTCCGGTTTCCTGTTCTCTTTCCCTCCCCGCTG-GGGGTTCT 63757 Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGG 369 |||| || ||||||| |||| || ||| || |||||| | | || ||| |||||| Sbjct 63756 TTTCCCCCTTCCCTCCCGGTCCTCCTTCGCTCTCGGTCCCCCCGGCGTCTTTCGCCTTGC 63697 Query 370 AGGATGGTCC 379 | |||||| Sbjct 63696 CCGGTGGTCC 63687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241557562112