Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq3417 183 1e-43 seq3418 176 2e-41 seq140 176 2e-41 seq2791 174 5e-41 seq1576 159 1e-36 seq2805 120 1e-24 seq1237 113 2e-22 seq1075 105 2e-20 seq1259 89.7 2e-15 seq188 86.0 2e-14 seq2779 78.8 3e-12 >seq3417 Length=265768 Score = 183 bits (202), Expect = 1e-43 Identities = 323/461 (70%), Gaps = 26/461 (6%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 ||||||||||| | |||||| ||||| |||| ||||| | || ||||| ||| |||| Sbjct 183543 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 183602 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || |||||||||| |||| | ||||| |||||||| ||||| |||||||||||||| Sbjct 183603 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 183662 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || ||| | ||| |||||||||| || ||||| |||||| |||| || | | || Sbjct 183663 AACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGT--ATGATG 183720 Query 214 ACCAT---CGGGGGTAGAGCACTGTTATGGCTAGGGGG---TCATTGCGACTTACCAAAC 267 | || | | ||||||||||| |||||||| | |||| || |||||||| | Sbjct 183721 TCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCATTTCGCCTTACCAACC 183780 Query 268 CATTGCAAACTCCGAATGC--GC----ATCAGTTTTACCGCGGGAGTGAGGGCATGGGTG 321 | | ||||||||||| | || ||| || ||| || || |||||| Sbjct 183781 CCAGGGAAACTCCGAATACAGGCCTAGATCGTTTGTAC----AGACAGACTTTTTGGGTG 183836 Query 322 CTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACA 381 ||||| ||| ||||||| || | || || | ||||||| ||| || | Sbjct 183837 CTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATC 183896 Query 382 GCTAAGTTAAACTAACGAAGTCTGAT--TGCTAAGACAGCTAGGATGTTGGCTTGGAAGC 439 || ||| || || |||| |||| || | |||| | |||| || ||||||||||| Sbjct 183897 ACTTAGTGGAA--AAGGAAG--TGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGC 183952 Query 440 AGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 ||||| || ||| |||| |||||| |||||||| ||| || Sbjct 183953 AGCCA-TCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAG 183992 >seq3418 Length=161897 Score = 176 bits (194), Expect = 2e-41 Identities = 396/586 (68%), Gaps = 42/586 (7%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | | |||||| | |||||||| ||||| Sbjct 106463 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGGCCCGAACCTGGGTGATCTATCCATG 106522 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 106523 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 106582 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 106583 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 106642 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 106643 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 106697 Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------G 287 || ||| | | ||| ||||||| | |||||||| |||| | Sbjct 106698 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 106755 Query 288 CATCAGTTTTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336 | || | || | || |||||| ||||| | |||| ||| | | Sbjct 106756 CCCCAAAATCACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTCCATCGTC 106815 Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGT--TAAACT 394 |||||| || | ||||| | ||||||||||||| ||||||| ||| ||| |||| Sbjct 106816 GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGCTAAA-- 106873 Query 395 AACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAA 454 || || || | ||| ||||||| |||| ||| || | |||||||||| | || ||| Sbjct 106874 AAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAA 106932 Query 455 GAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTT 514 |||||||||| |||||||| ||||| || ||| || || |||| |||| Sbjct 106933 GAGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGCACGGG-GCTAAGCG 106991 Query 515 GTCTACCGAAGCAGTGGGATCATTTATATG--ATCGGTAGGGGAGC 558 ||| ||||||| ||||||| | | | | |||||||||||||| Sbjct 106992 ATCTGCCGAAGCTGTGGGAT--GTAAAAAGACATCGGTAGGGGAGC 107035 Score = 176 bits (194), Expect = 2e-41 Identities = 396/586 (68%), Gaps = 42/586 (7%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | | |||||| | |||||||| ||||| Sbjct 143552 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGGCCCGAACCTGGGTGATCTATCCATG 143493 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 143492 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 143433 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 143432 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 143373 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 143372 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 143318 Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------G 287 || ||| | | ||| ||||||| | |||||||| |||| | Sbjct 143317 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 143260 Query 288 CATCAGTTTTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336 | || | || | || |||||| ||||| | |||| ||| | | Sbjct 143259 CCCCAAAATCACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTCCATCGTC 143200 Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGT--TAAACT 394 |||||| || | ||||| | ||||||||||||| ||||||| ||| ||| |||| Sbjct 143199 GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGCTAAA-- 143142 Query 395 AACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAA 454 || || || | ||| ||||||| |||| ||| || | |||||||||| | || ||| Sbjct 143141 AAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAA 143083 Query 455 GAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTT 514 |||||||||| |||||||| ||||| || ||| || || |||| |||| Sbjct 143082 GAGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGCACGGG-GCTAAGCG 143024 Query 515 GTCTACCGAAGCAGTGGGATCATTTATATG--ATCGGTAGGGGAGC 558 ||| ||||||| ||||||| | | | | |||||||||||||| Sbjct 143023 ATCTGCCGAAGCTGTGGGAT--GTAAAAAGACATCGGTAGGGGAGC 142980 >seq140 Length=324460 Score = 176 bits (194), Expect = 2e-41 Identities = 396/586 (68%), Gaps = 42/586 (7%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | | |||||| | |||||||| ||||| Sbjct 312243 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGGCCCGAACCTGGGTGATCTATCCATG 312302 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 312303 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 312362 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 312363 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 312422 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 312423 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 312477 Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------G 287 || ||| | | ||| ||||||| | |||||||| |||| | Sbjct 312478 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 312535 Query 288 CATCAGTTTTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336 | || | || | || |||||| ||||| | |||| ||| | | Sbjct 312536 CCCCAAAATCACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTCCATCGTC 312595 Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGT--TAAACT 394 |||||| || | ||||| | ||||||||||||| ||||||| ||| ||| |||| Sbjct 312596 GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGCTAAA-- 312653 Query 395 AACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAA 454 || || || | ||| ||||||| |||| ||| || | |||||||||| | || ||| Sbjct 312654 AAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAA 312712 Query 455 GAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTT 514 |||||||||| |||||||| ||||| || ||| || || |||| |||| Sbjct 312713 GAGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGCACGGG-GCTAAGCG 312771 Query 515 GTCTACCGAAGCAGTGGGATCATTTATATG--ATCGGTAGGGGAGC 558 ||| ||||||| ||||||| | | | | |||||||||||||| Sbjct 312772 ATCTGCCGAAGCTGTGGGAT--GTAAAAAGACATCGGTAGGGGAGC 312815 Score = 172 bits (190), Expect = 2e-40 Identities = 396/586 (68%), Gaps = 43/586 (7%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | | |||||| | |||||||| ||||| Sbjct 320217 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGGCCCGAACCTGGGTGATCTATCCATG 320158 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 320157 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 320098 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 320097 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 320038 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 320037 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 319983 Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------G 287 || ||| | | ||| ||||||| | |||||||| |||| | Sbjct 319982 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 319925 Query 288 CATCAGTTTTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336 | || | || | || |||||| ||||| | |||| ||| | | Sbjct 319924 CCCCAAAATCACAGGGGTCAAGGTCGGCCAGTGAGACGATGGG-GATAAGCTCCATCGTC 319866 Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGT--TAAACT 394 |||||| || | ||||| | ||||||||||||| ||||||| ||| ||| |||| Sbjct 319865 GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGCTAAA-- 319808 Query 395 AACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAA 454 || || || | ||| ||||||| |||| ||| || | |||||||||| | || ||| Sbjct 319807 AAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAA 319749 Query 455 GAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTT 514 |||||||||| |||||||| ||||| || ||| || || |||| |||| Sbjct 319748 GAGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGCACGGG-GCTAAGCG 319690 Query 515 GTCTACCGAAGCAGTGGGATCATTTATATG--ATCGGTAGGGGAGC 558 ||| ||||||| ||||||| | | | | |||||||||||||| Sbjct 319689 ATCTGCCGAAGCTGTGGGAT--GTAAAAAGACATCGGTAGGGGAGC 319646 Score = 141 bits (156), Expect = 3e-31 Identities = 370/556 (67%), Gaps = 40/556 (7%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | | |||||| | |||||||| ||||| Sbjct 288092 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGGCCCGAACCTGGGTGATCTATCCATG 288151 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 288152 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAAT- 288210 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 | |||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 288211 -AGCGATGAGTTGTGGTTAGGGGTGAAATGC-ACTCGAACCCAGAGCTAGCTGGTTCTC- 288267 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 288268 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 288322 Query 237 ATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------GC 288 | || | | ||| ||||||| | |||||||| |||| | | Sbjct 288323 CGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGAC 288380 Query 289 ATCAGTTTTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCG 337 || | || | || |||||| ||||| | |||| ||| | || Sbjct 288381 CCCAAAATCACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTCCATCGTCG 288440 Query 338 AGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGT--TAAACTA 395 |||||| || | ||||| | ||||||||||||| ||||||| ||| ||| |||| Sbjct 288441 AGAGGAAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGCTAAAAGG 288500 Query 396 ACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAG 455 | | || | ||| ||||||| |||| ||| || | |||||||||| | || |||| Sbjct 288501 AGGTAG--GGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAG 288557 Query 456 AGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTG 515 ||||||||| |||||||| ||||| || ||| || || |||| |||| Sbjct 288558 AGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGCACGGGGGCTAAGCGA 288617 Query 516 TCTACCGAAGCAGTGG 531 ||| ||||||| |||| Sbjct 288618 TCTGCCGAAGCTGTGG 288633 Score = 132 bits (146), Expect = 2e-28 Identities = 315/470 (67%), Gaps = 36/470 (8%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | | |||||| | |||||||| ||||| Sbjct 242466 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGGCCCGAACCTGGGTGATCTATCCATG 242407 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 242406 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 242347 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 242346 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 242287 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 242286 CCGAAATGCGTTGAGGCGTAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 242232 Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------- 286 || ||| | | ||| ||||||| | |||||||| |||| | Sbjct 242231 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 242174 Query 287 -----GCATCA----GTTTTACCGCGG-GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336 |||| | | | ||| |||||| ||||| | |||| ||| | | Sbjct 242173 CCCCAAAATCATAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTCCATCGTC 242114 Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGT--TAAACT 394 |||||| || | ||||| | ||||||||||||| ||||||| ||| ||| |||| Sbjct 242113 GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGCTAAA-- 242056 Query 395 AACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCA 444 || || || | ||| ||||||| |||| ||| || | |||| ||||| Sbjct 242055 AATGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGTAGCCA 242006 Score = 127 bits (140), Expect = 7e-27 Identities = 318/473 (67%), Gaps = 40/473 (8%) Strand=Plus/Minus Query 37 CCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGT 96 |||||| | |||||||| ||||| ||||||||||| | ||| | || ||||| Sbjct 323922 CCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTT-GGTGAAACTAAAGTGAGGT 323864 Query 97 CCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAA 156 ||||||| ||| |||||||| ||| || ||||||| ||||| ||||||||||| || | Sbjct 323863 CCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACT 323804 Query 157 CAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC- 215 | ||| || |||||||||||| |||||| || ||| || ||| | || Sbjct 323803 CGAACCCAGAGCTAGCTGGTTCTC-CCGAAATGCGTTGAGGCGCAGC----AGT-TGACT 323750 Query 216 ---CATCGGGGGTAGAGCACTGTTATGGCTAGGG-GGTCATTGCGACTTACCAAACCATT 271 |||| ||||| ||||||||| || ||| | | ||| ||||||| | Sbjct 323749 GGACATCTAGGGTAAAGCACTGTTTCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAG 323692 Query 272 GCAAACTCCGAATGC--------GCATCAGTTTTACCGCGG-----------GAGTGAGG 312 |||||||| |||| | | || | || | || |||||| Sbjct 323691 GCAAACTCTGAATACTAGATATGACCCCAAAATCACAGGGGTCAAGGTCGGCCAGTGAGA 323632 Query 313 GCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGC-TAAGGCCC 371 ||||| |||| ||| | ||||||| || | ||||| | |||| |||||||| Sbjct 323631 CGATGGGGAATAAGCTCCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTTAAGGCCC 323572 Query 372 CGAAATGACAGC--TAAGT--TAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGT 427 | ||||||| || | ||| |||| || || || | ||| ||||||| |||| || Sbjct 323571 CTAAATGACCGCGTTCAGTGCTAAA-AAAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGT 323513 Query 428 TGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 | || | |||||||||| | || ||||||||||||| |||||||| ||||| Sbjct 323512 TTGCCTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAG 323461 >seq2791 Length=2666840 Score = 174 bits (192), Expect = 5e-41 Identities = 321/461 (70%), Gaps = 26/461 (6%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 ||||||||||| | |||||| ||||| |||| ||||| | | ||||| ||| |||| Sbjct 2569154 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGATCTCTAACAGGCCTTGGA 2569213 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || |||||||||| |||| | ||||| |||||||| ||||| |||||||||||||| Sbjct 2569214 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 2569273 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || ||| | ||| |||||||||| || |||| |||||| |||| || | | || Sbjct 2569274 AACCAAGATCGGATATAGCTGGTTTTCCGTGAAATCTATTTCAGTAGAGCGT--ATGATG 2569331 Query 214 ACCAT---CGGGGGTAGAGCACTGTTATGGCTAGGGGG---TCATTGCGACTTACCAAAC 267 | || | | ||||||||||| |||||||| | |||| || |||||||| | Sbjct 2569332 TCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCATTTCGCCTTACCAACC 2569391 Query 268 CATTGCAAACTCCGAATGC--GC----ATCAGTTTTACCGCGGGAGTGAGGGCATGGGTG 321 | | ||||||||||| | || ||| || ||| || || |||||| Sbjct 2569392 CCAGGGAAACTCCGAATACAGGCCTAGATCGTTTGTAC----AGACAGACTTTTTGGGTG 2569447 Query 322 CTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACA 381 ||||| ||| ||||||| || | || || | ||||||| ||| || | Sbjct 2569448 CTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATC 2569507 Query 382 GCTAAGTTAAACTAACGAAGTCTGAT--TGCTAAGACAGCTAGGATGTTGGCTTGGAAGC 439 || ||| || || |||| |||| || | |||| | |||| || ||||||||||| Sbjct 2569508 ACTTAGTGGAA--AAGGAAG--TGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGC 2569563 Query 440 AGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 ||||| || ||| |||| |||||| |||||||| ||| || Sbjct 2569564 AGCCA-TCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAG 2569603 >seq1576 Length=5940209 Score = 159 bits (176), Expect = 1e-36 Identities = 387/574 (67%), Gaps = 39/574 (7%) Strand=Plus/Minus Query 13 AGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAA 72 ||||| | ||| ||| | | | |||||| | |||||||| ||||| |||||||||| Sbjct 5844169 AGGGCAATTGTCACTGCTTATGGGCCCGAACCTGGGTGATCTATCCATGACCAGGATGAA 5844110 Query 73 GGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT-AGGGGATGAG 131 | | ||| | || ||||||| |||||| ||| |||||||| |||| || ||||||| Sbjct 5844109 GCTTGGGTGAAACTAAGTGGAGGTACGAACCGACTGATGTTGAAGAATTCAGCGGATGAG 5844050 Query 132 CTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTA 191 ||||| | ||||||||| || | | ||| || |||| ||||||| |||||| Sbjct 5844049 TTGTGGTTCGGGGTGAAATGCCACTCGAACCCAGAGCTAGCAGGTTCTCCCCGAAATGCG 5843990 Query 192 TTTAGGTAGTGCCTCAAGTATC--ACCATCG-GGGGTAGAGCACTGTTATGGCTAGGGGG 248 || ||| || || | | | |||| |||||| ||||||||| || ||| Sbjct 5843989 TTGAGGC---GCAGCAGTTGACTGAACATCTAGGGGTAAAGCACTGTTTCGGTGCGGGCC 5843933 Query 249 TC-ATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGC--------------ATCA- 292 | | ||| ||||||| | |||||||| |||| | |||| Sbjct 5843932 GCGAGAGCGG--TACCAAATCGAGGCAAACTCTGAATACTAGATATGACCCCAAAATCAC 5843875 Query 293 ---GTTTTACCGCGGG-AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGA 348 | | | ||| |||||| ||||| | |||| ||| | ||||||| || | Sbjct 5843874 AGGGGTCAAGGTCGGCCAGTGAGACGATGGGAGATAAGCTCCATCGTCGAGAGGGAAACA 5843815 Query 349 ATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGT--TAAACTAACGAAGTCTGA 406 ||||| | |||||||||||| ||||||| ||| ||| |||| || || || | Sbjct 5843814 GCCCGGATCACTAGCTAAGGCCCCTAAATGACCGCTCAGTGCTAAA--AAGGAGGTAGGG 5843757 Query 407 TTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACA 466 |||| ||||||| |||| ||| || | |||||||||| | || ||||||||||||| | Sbjct 5843756 TTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATA 5843698 Query 467 GCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGC 526 ||||||| ||||| || ||| || || |||| |||| ||| ||||||| Sbjct 5843697 GCTCACTGATCGAGCGCTCTTGCGCCGAAGATTCACGGG-GCTAAGCGATCTGCCGAAGC 5843639 Query 527 AGTGGGATCATTTATATG--ATCGGTAGGGGAGC 558 ||||||| | | | | |||||||||||||| Sbjct 5843638 TGTGGGAT--GTAAAAAGACATCGGTAGGGGAGC 5843607 Score = 118 bits (130), Expect = 4e-24 Identities = 131/175 (75%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 13 AGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAA 72 ||||| | ||| ||| | | | |||||| | |||||||| ||||| |||||||||| Sbjct 5836589 AGGGCAATTGTCACTGCTTATGGGCCCGAACCTGGGTGATCTATCCATGACCAGGATGAA 5836530 Query 73 GGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGC 132 | | ||| | || ||||||| |||||| ||| |||||||| ||| || ||||||| Sbjct 5836529 GCTTGGGTGAAACTAAGTGGAGGTACGAACCGACTGATGTTGAAGAATCAGCGGATGAGT 5836470 Query 133 TGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 ||||| ||||||||||| || | | ||| || |||| ||||||| |||||| Sbjct 5836469 TGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCAGGTTCTCCCCGAAA 5836415 >seq2805 Length=4498339 Score = 120 bits (132), Expect = 1e-24 Identities = 123/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 19 ACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCG 78 |||||| ||| | | | |||||| | |||||||| ||||| ||||||||||| | | Sbjct 4254446 ACAGTCACTGCTTATGGGCCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGG 4254387 Query 79 GTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGG 138 || | || |||||||||||||| ||| |||||||| ||| || ||||||| ||||| Sbjct 4254386 GTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGT 4254327 Query 139 TAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 ||||||||||| || | | ||| || ||||||||||| Sbjct 4254326 TAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCT 4254286 >seq1237 Length=2783542 Score = 113 bits (124), Expect = 2e-22 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 51 ATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAAT 110 ||||| ||||| ||||| ||||| | ||| | || |||||||||||||| ||| || Sbjct 1808897 ATCTATCCATGACCAGGGTGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGAT 1808838 Query 111 GTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATA 170 |||||| |||||| ||||||| ||||| ||||||||||| || | | ||| || || Sbjct 1808837 GTTGAAGAATTAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTA 1808778 Query 171 GCTGGTTCTCTCCGAAA 187 |||||||||| ||||| Sbjct 1808777 GCTGGTTCTCCTCGAAA 1808761 >seq1075 Length=227101 Score = 105 bits (116), Expect = 2e-20 Identities = 108/140 (77%), Gaps = 1/140 (1%) Strand=Plus/Minus Query 48 GTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACT 107 |||||||| ||||| ||||||||||| | ||| | || |||||||||||||| ||| Sbjct 195167 GTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACT 195108 Query 108 AATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAA 167 |||||||| ||| | | |||||| ||||| ||||||||||| || | | || || Sbjct 195107 GATGTTGAAGAATCA-GCGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAATCCAGAG 195049 Query 168 ATAGCTGGTTCTCTCCGAAA 187 |||||||||||| || ||| Sbjct 195048 CTAGCTGGTTCTCCCCAAAA 195029 >seq1259 Length=3409560 Score = 89.7 bits (98), Expect = 2e-15 Identities = 126/175 (72%), Gaps = 8/175 (5%) Strand=Plus/Plus Query 116 AAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGG 175 ||||| |||||||| ||||| || ||||||||||| || ||| | ||| |||||||| Sbjct 349969 AAAATACGGGGATGACTTGTGGCTAAGGGTGAAAGGCCAACCAAGATCGGATATAGCTGG 350028 Query 176 TTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCAT---CGGGGGTAGAGCAC 232 || || ||||| |||||| |||| || | | || | || | | |||||||||| Sbjct 350029 TTTTCCGCGAAATCTATTTCAGTAGAGCGT--ATGATGTCGATGGCCCGAGGTAGAGCAC 350086 Query 233 TGTTATGGCTAGGGGG---TCATTGCGACTTACCAAACCATTGCAAACTCCGAAT 284 | |||||||| | |||| || |||||||| || | ||||||||||| Sbjct 350087 TCAATGGGCTAGGGTGGCCCCATTTCGCCTTACCAACCCCAGGGAAACTCCGAAT 350141 >seq188 Length=4900474 Score = 86.0 bits (94), Expect = 2e-14 Identities = 165/234 (71%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 329 CCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGT 388 |||||| |||||| || | ||||| | |||||||||||| ||||||| ||| ||| Sbjct 1814986 CCGTGC--GAGAGGGAAACAGCCCGGATCACTAGCTAAGGCCCCTAAATGACCGCTCAGT 1815043 Query 389 --TAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATT 446 |||| || | | || | ||| ||||| | |||| ||| || | |||||||||| Sbjct 1815044 GCTAAA-TAGC-AGGTAGGGGTGCAGAGACAACCAGGAGGTTTGCCTAGAAGCAGCCACC 1815101 Query 447 CATTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGT 506 | || ||||||||||||| |||||||| ||||| || ||| || || |||| Sbjct 1815102 C-TTGAAAGAGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGCACGGGG 1815160 Query 507 ATTAAGTTGTCTACCGAAGCAGTGGGATCATTTATATGA--TCGGTAGGGGAGC 558 | ||| ||| | ||||| |||||| | | | || ||||||||||||| Sbjct 1815161 CT-AAGCGATCTGCTGAAGCTATGGGATG--TAAAAAGACATCGGTAGGGGAGC 1815211 >seq2779 Length=4844220 Score = 78.8 bits (86), Expect = 3e-12 Identities = 76/98 (78%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 90 TGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAA 149 |||| ||| ||||| ||| |||||||| ||| || |||||| ||||| |||| |||||| Sbjct 3421387 TGGAAGTCTGAACCGACTGATGTTGAAGAATCAGCAGATGAGTTGTGGTTAGGAGTGAAA 3421328 Query 150 GGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 || | | ||| || |||||||||||| |||||| Sbjct 3421327 TGCCACTCGAACGCAGAGCTAGCTGGTTCTCCCCGAAA 3421290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689542249472