Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq418 84.2 3e-11 >seq418 Length=2515040 Score = 84.2 bits (92), Expect = 3e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 162615 CGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGAT 162674 ||| || || ||||| |||||| | | | | || |||| ||||| || || ||||| Sbjct 2302609 CGGCATCCTGTTCAACCACGAATCCCCGAGACGCGGGGAGAATTTCGTGACCCGGAAGAT 2302668 Query 162675 CGTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCAAAGTGATCTACAACTTGGAAACCT 162734 | ||| ||| || || || | | || |||||||| | || || || ||| | Sbjct 2302669 CACCCGGGCCGTGGGGCGGATCAAAATCGGGCTCCAAAGCAAGCTCTTCCTGGGGAACTT 2302728 Query 162735 CAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCT 162794 | || | | ||||||||| ||| ||||| || || || |||||| ||||||| Sbjct 2302729 ACAGGCGTCAAGGGACTGGGGATTCGCAGGGGACTATGTGGAAGCAATGTGGATGATGCT 2302788 Query 162795 TCAGCAAGAGAAGCCAGATGATTATGTGATCGCAAC 162830 |||||| |||||||| || ||||| ||| | || || Sbjct 2302789 TCAGCAGGAGAAGCCGGACGATTACGTGGTGGCCAC 2302824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691429657405680