Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq25772 71.6 6e-11 seq8471 71.6 6e-11 seq7760 71.6 6e-11 >seq25772 Length=11745 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||||||| ||| ||||| |||||||| Sbjct 125 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAATCGGGAACAGCCCAGC 67 >seq8471 Length=2682 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| ||||||| |||| |||| ||||| |||||||| Sbjct 2567 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGACGAGCGAACCGGGAACAGCCCAGC 2625 >seq7760 Length=2674 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||| ||||||| |||| ||||| |||||||| Sbjct 108 GGAAAAGAAACTTACAAGGATTCCCCAAGTAGCGGCGAGCGAACCGGGAACAGCCCAGC 50 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230232816000