Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq7612 75.2 1e-11 seq32468 73.4 5e-11 >seq7612 Length=2673 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 2626 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATACCATGCTAATGTATACAGAGCGTA 2568 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 2567 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 2530 >seq32468 Length=67942 Score = 73.4 bits (80), Expect = 5e-11 Identities = 63/77 (82%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 34 TCCTATTCTATTATTCCATGCTAATGTAT-TCGGGCGTAAGCCTGCTTTGAACACTCTAA 92 |||||| | |||| |||||||||||||| | | ||||| || |||||||| |||||||| Sbjct 32364 TCCTATAATGTTATCCCATGCTAATGTATATAGAGCGTAGGCTTGCTTTGAGCACTCTAA 32305 Query 93 TTTTCTCAAGGTAAAAG 109 ||| |||| |||| || Sbjct 32304 TTTCTTCAAAGTAACAG 32288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594753711600