Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Juglans_20regia_20[refseq_20GCF_5F001411555.1_202015-10-22] 105,803 sequences; 699,672,627 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq51629 122 2e-25 seq54053 84.2 6e-14 >seq51629 Length=49189 Score = 122 bits (134), Expect = 2e-25 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| | ||||||| |||||||||||||||||||||| ||| ||| Sbjct 46571 TATCTGGGGAATAAGCATCAGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 46512 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 ||| |||| |||||| | |||||||||||||| | ||| | | | |||| | | || Sbjct 46511 AAGTGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGACTTTTTAAGTCCGCCGT 46452 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| | | || | | ||| | || |||| | || Sbjct 46451 CAAATCCCAGGGCTCAACCCCGAATAGGCGATGGAAACTACCAAGCTGGAGTACGGTAGG 46392 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATAT 224 || | |||||| | ||| ||| |||||||||||||| || Sbjct 46391 GGCAGAGGGAATTACCGGTGGAGCGGTGAAATGCGTAGAGAT 46350 >seq54053 Length=25039 Score = 84.2 bits (92), Expect = 6e-14 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 12 AATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAA 71 |||||||| || |||||| ||||||||| ||||| |||||| ||| ||||||||||| Sbjct 17084 AATAAGCATCGACTAACTCTGTGCCAGCAACCGCGATAATACAGAGGATGCAAGCGTTAT 17025 Query 72 TCGGAATTACTGGGCGTAAAGCGT 95 |||||| | ||| | |||||||| Sbjct 17024 CCGGAATGATTGGACATAAAGCGT 17001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1288235564512