Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Juglans_20regia_20[refseq_20GCF_5F001411555.1_202015-10-22] 105,803 sequences; 699,672,627 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq2010 147 5e-33 seq1021 141 2e-31 seq54391 136 8e-30 seq55279 116 8e-24 seq55692 111 3e-22 seq1672 109 1e-21 seq56570 107 4e-21 seq49181 96.9 7e-18 seq48569 93.3 9e-17 >seq2010 Length=63679 Score = 147 bits (162), Expect = 5e-33 Identities = 200/274 (73%), Gaps = 9/274 (3%) Strand=Plus/Plus Query 86 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTA 145 |||||||| ||| || ||||||| |||| |||||||||||||||||||| | | || | Sbjct 39215 GAACTTACTCGATAAAGAATTTCACTACTTTAGGACCGTTATAGTTACGACAATCATTCA 39274 Query 146 CTGGGGCTTAAGTTCACTGCT-TCGATTGCTC---TAACAGATCCCCTTAACCTTCCAGC 201 | ||| ||| |||| ||| || | || | || | |||| ||||||| | Sbjct 39275 CAGGG-CTTCAGTTGTTGGCTCTCTTATTATCAGGTCACCAACTTCCTTGACCTTCCGTC 39333 Query 202 ACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTG 261 || ||||||| ||||| | |||||| ||||| |||||| || | || |||| ||||| Sbjct 39334 ACTGGGCAGGTGTCAGACCTCATACATGGTCTTACGACTTTGCGAAGACTTGTGCTTTTG 39393 Query 262 GTAAACAGTCGCTTGGGCCTATTCTCTGC---GGCCTGTCATAGACAGGCACCCCTTCTC 318 |||||||||||| |||||| || || | ||| | || || |||||||| || Sbjct 39394 GTAAACAGTCGCCCGGGCCTGGTCACTACTATCTCCTTTGTGAG-GAGACACCCCTTATC 39452 Query 319 CCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || |||||||| || |||||||| ||||||||| Sbjct 39453 CCAAAGTTACGATGTTATTTTGCCAAGTTCCTTA 39486 >seq1021 Length=676494 Score = 141 bits (156), Expect = 2e-31 Identities = 134/169 (79%), Gaps = 4/169 (2%) Strand=Plus/Minus Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| ||||||| ||| ||||| | |||||| || |||||| ||||| ||||| || | Sbjct 334103 CCTTGACCTTCCGACACTGGGCAAGTGTCAGCCCCCATACATGGTCTTATGACTTTGCGG 334044 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCATAGA 303 || ||||||||||||||||||||||||| |||||| || ||||| ||| | || Sbjct 334043 AATCCTGTGTTTTTGGTAAACAGTCGCTCGGGCCTGGTCACTGCGACCCCCTTTGTGAG- 333985 Query 304 CAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 |||||| |||||||| ||||||||||| |||| || |||||||||| Sbjct 333984 GAGGCACTCCTTCTCCAGAAGTTACGGGGCTATTTCGCTGAGTTCCTTA 333936 >seq54391 Length=48172 Score = 136 bits (150), Expect = 8e-30 Identities = 125/156 (80%), Gaps = 4/156 (3%) Strand=Plus/Plus Query 81 GGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCC 140 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 19756 GGTCGGAACTTACCCGACAAGGAATTTTGCTACCTTAGGACCGTTATAGTTACGGCCGGC 19815 Query 141 GTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAGATCCCCTTAACCTT 196 ||| || ||||||| || | ||| | | | || | || | |||| ||||| Sbjct 19816 GTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCAACTTCCTTGACCTT 19875 Query 197 CCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTC 232 || |||| |||||||||||||| || |||||| ||| Sbjct 19876 CCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTC 19911 >seq55279 Length=95036 Score = 116 bits (128), Expect = 8e-24 Identities = 169/237 (71%), Gaps = 10/237 (4%) Strand=Plus/Plus Query 27 ATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGG 86 |||||| ||||||| | ||| |||||| | ||||||| | ||||||||| |||| Sbjct 65883 ATTTCATCGAGTCTCTCTCCAAGATAGTGCCTAGATCGTTATGTCTTTCGTGCTAGTCGA 65942 Query 87 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 146 |||||||||||||| ||||| ||||| |||| ||||||||||||| | |||| || || Sbjct 65943 AACTTACCCGACAAAGAATTCTGCTACGTTAGAACCGTTATAGTTATGATCGCCATTCAC 66002 Query 147 TGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAGATCCCCTTAACCTTCCAGCA 202 ||||||| || | ||| | | | || | | | |||| |||||| ||| Sbjct 66003 AGGGGCTTCGATTGCCGGCTCCCCTATCATCAAGTCATTAACTTCCTTGACCTTCTGGCA 66062 Query 203 CCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTT 259 | ||| |||| | ||| |||| ||||| ||||| | ||| |||| |||||| Sbjct 66063 CTGGGTAGGCATTAGC------ACATGGTCTTAAGACTTTGTAGAGACCTATGTTTT 66113 >seq55692 Length=1752543 Score = 111 bits (122), Expect = 3e-22 Identities = 88/106 (83%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||| ||||| | ||||| ||||||| |||||| Sbjct 173820 GCATCTTCACAGACATGTCTATTTCACCAAGTCTCTCTCCGAGACCGTGCCCAGATCGTT 173761 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTA 112 | |||| |||||| ||||||||||||||||||||| |||||||||| Sbjct 173760 ATGCCTCTCGTGCAGGTCGGAACTTACCCGACAAGCAATTTCGCTA 173715 >seq1672 Length=1445705 Score = 109 bits (120), Expect = 1e-21 Identities = 126/168 (75%), Gaps = 4/168 (2%) Strand=Plus/Plus Query 188 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGA 247 ||| ||||||| ||| || |||||||||| || |||||| ||| | ||||| || || Sbjct 145760 CTTGACCTTCCGGCATTAGGTAGGCGTCAGCCCCCATACATGGTCCTATGACTTTGCGGA 145819 Query 248 AACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTG---CGGCCTGTCATAGAC 304 ||||||||||||||||||||||||| || ||| || || | ||| | || Sbjct 145820 GACCTGTGTTTTTGGTAAACAGTCGCCCGGACCTGGTCATTGTGACCCCCTTTGTGAG-G 145878 Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || ||||||||||| ||||||| || |||||||| ||||||||| Sbjct 145879 AGTTACCCCTTCTCCAGAAGTTACAAGGCTATTTTGCCAAGTTCCTTA 145926 >seq56570 Length=6353 Score = 107 bits (118), Expect = 4e-21 Identities = 167/237 (70%), Gaps = 10/237 (4%) Strand=Plus/Minus Query 27 ATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGG 86 |||||| ||||||| | ||| |||||| | || |||| | ||||||||| |||| Sbjct 6112 ATTTCATCGAGTCTCTCTCCAAGATAGTGCCTAGATTGTTATGTCTTTCGTGCTAGTCGA 6053 Query 87 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 146 |||||||||||||| ||||| ||||| |||| ||||||||||||| | |||| || || Sbjct 6052 AACTTACCCGACAAAGAATTCTGCTACGTTAGAACCGTTATAGTTATGATCGCCATTCAC 5993 Query 147 TGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAGATCCCCTTAACCTTCCAGCA 202 ||| ||| || | ||| | | | || | | | |||| |||||| ||| Sbjct 5992 CGGGACTTCGATTGCCGGCTCCCCTATCATCAAGTCATTAACTTCCTTGACCTTCTGGCA 5933 Query 203 CCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTT 259 | ||||||| | ||| |||| ||||| ||||| | ||| |||| |||||| Sbjct 5932 CTTGGCAGGCATTAGC------ACATGGTCTTAAGACTTTGTAGAGACCTATGTTTT 5882 >seq49181 Length=24962 Score = 96.9 bits (106), Expect = 7e-18 Identities = 114/153 (75%), Gaps = 1/153 (1%) Strand=Plus/Plus Query 8 CATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTA 67 |||||||| | || | |||||||| | || | || |||| | || |||| || Sbjct 17400 CATCTTCATAGATATGTCTATTTCACCCAACCTTTCTCCGAAACAGCACTCATATCGCTA 17459 Query 68 CGCCTTTCGTGCGGGTCGGAACTT-ACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||||| | |||| ||||||| ||| ||||| |||||| ||||||||||||| ||| Sbjct 17460 GGCCTTTCATACGGGCTGGAACTTTACCTGACAAAGAATTTTGCTACCTTAGGACTATTA 17519 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTT 159 ||| |||| ||| ||| | |||||||| |||| Sbjct 17520 TAGGTACGACCGTTGTTCAATGGGGCTTCAGTT 17552 >seq48569 Length=38059 Score = 93.3 bits (102), Expect = 9e-17 Identities = 96/125 (77%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 27 ATTTCACCGAG--TCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTC 84 ||||||| ||| ||| | | |||||||||||| ||||||||||||| | | || | Sbjct 10814 ATTTCACTGAGATTCTCTCTTCAAGACAGTGCCCAGATCGTTACGCCTTACTTAAGGATT 10755 Query 85 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTT 144 ||||||||| |||||||| ||| ||| |||| ||||| ||||||| || | |||| Sbjct 10754 AAAACTTACCCAACAAGGAACTTCACTATTTTAGAACCGTCATAGTTATGGTGGTCGTTC 10695 Query 145 ACTGG 149 ||||| Sbjct 10694 ACTGG 10690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1061275948928