Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= AAMG01000056.1 Length=332 Score E Sequences producing significant alignments: (Bits) Value seq63997 73.4 8e-11 >seq63997 Length=3562 Score = 73.4 bits (80), Expect = 8e-11 Identities = 111/157 (71%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 173 CTCCTGCGTCCCCACGTCACCCTCAAATGTAGTAACGGAATACTAACCGTTTCTGCCATC 232 || || ||||||||| || | | | || || | |||||| ||||| || | ||||| Sbjct 1773 CTTCTTCGTCCCCACTTCGCAGTAATATTAAGCACAGGAATATTAACCTGTTGT-CCATC 1715 Query 233 GGTCTCGCCGTTCGGCTGAACCTTATGACCCGACTTACCCTGATCCGATTAGCGGTGATC 292 | ||| ||| || ||||| | || ||||||||| ||||||| || || | Sbjct 1714 GACTACGCTTTTCAGCCTCGCCTTAGGGGTCGGCTTACCCTGCCCCGATTAACGTTGGAC 1655 Query 293 AGGAAACCTTAGTCTTTCGGCGAGGGGGTTTCCCACC 329 |||||||||| || |||||||||| ||||| |||| Sbjct 1654 AGGAAACCTTGGTTTTTCGGCGAGCAGGTTTTTCACC 1618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 951589344000