Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq477538 111 2e-22 seq775705 95.1 2e-17 >seq477538 Length=642 Score = 111 bits (122), Expect = 2e-22 Identities = 68/70 (97%), Gaps = 2/70 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 16 GTACAAAGGGCAGGGACGTAGTCAACGCGAGC-TGATGACTCGCGCTTACTAGGAA-TTC 73 Query 61 CTCGTTGAAG 70 |||||||||| Sbjct 74 CTCGTTGAAG 83 >seq775705 Length=347 Score = 95.1 bits (104), Expect = 2e-17 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 101 CGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA 160 || |||||||||||||||| | | | |||||||||||||| ||| |||||||||||||| Sbjct 72 CGTTGAAATTTCAAAGATTTCTCAGGCCTGTCGGCCAAGGCTATATACTCGTTGAATACA 13 Query 161 TCAGTGTAGCGC 172 |||||||||||| Sbjct 12 TCAGTGTAGCGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 745617538650