Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq807810 181 2e-43 >seq807810 Length=330 Score = 181 bits (200), Expect = 2e-43 Identities = 213/284 (75%), Gaps = 7/284 (2%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||||| || |||| || | ||| | |||||||||||||| ||||||||||| | Sbjct 15 TGCTCTTCATTGAGTGTCGAGGTGGGCCGGCACTTTTACTTTGAACAAATTAGAGTGCTT 74 Query 100 AAAGCAGGCCT----TTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 |||||||| |||| |||| | |||||||||||| ||||||||| | |||| Sbjct 75 CAAGCAGGCTGGATATTGCCTGAATGCTAGTGCATGGAATAATGGAATAGGACCT-CGGT 133 Query 156 TCTATTTTGTTGGTTTCTAGGACC-GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 |||||||||||||||| || ||| | |||||||||||| | || || |||||| | Sbjct 134 TCTATTTTGTTGGTTTTCAGAACCAGAGGTAATGATTAATGGAGACAGGCGGGGGCATTC 193 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||||| || ||||||||||||||||||| ||||| || |||||||| Sbjct 194 GTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGGACCGAAGCGAAAGCA 253 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || ||||||||||| || || |||| ||||||||||||| || Sbjct 254 TTTGCCAAGGATGTTCTCGTTGATCA-AGAACGAAAGTTAGAGG 296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 907181841280