Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq63997 77.0 3e-12 >seq63997 Length=3562 Score = 77.0 bits (84), Expect = 3e-12 Identities = 129/185 (70%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 1 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 60 |||||||| ||||||| ||||||||||||||| ||| || | ||||| ||| || | Sbjct 1930 TTACCTGATGCTTAGAGGCTTTTCTTGGAAGCGTGGTATTAGTTACTTCATCACCTTA-- 1873 Query 61 GATAACTCGTCATCA-GCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTA 119 | ||||||||||| || | | ||| |||||||| ||||| || |||| Sbjct 1872 -GTGACTCGTCATCATGCCTCAGATTAAAGATAACCGGATTTGCCTAATTATCATACCTA 1814 Query 120 CCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGC 179 | |||||| ||| |||| | || | | |||| |||||| |||||| | |||| Sbjct 1813 CACATTTAAACCAGGATAACCGTCACCTGGATAACCTAACCTTCTTCGTCCCCACTTCGC 1754 Query 180 ATTAA 184 | ||| Sbjct 1753 AGTAA 1749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514000175580